Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1806 ATGGCAGATAGTTCAGTATCATTTTTACTGGACAAGCTTACTTCCTTGCTTCAAGAAGAAGTGAATCTACAGATAGGGGTTCGTGAAGATGTTCAGTACATCAAAGATGAACTTGAACGCCACAAGGCCATCTTAAGGGTGGCTGATTCTCTGGAAGACAAAGACCCTGAACTCAAAGCATGGGTTAAAAGAGTAAGAGATATCGCTCACGACATGGAAGATTCTATAGATGAATTCAATCTTCACCTTGTTGATCCACATGGGCAAGGCAACAATTCATTTCATAAGATTGCTTTTGGCATTAAGACCGTGAAAGCCCGGCATAGAATTGCTTCAGACATACAAAGTATCAAATCCAAAGTGGAAATTATCTCCCAGGGACGTCCTAGCATAACTGGAATAGGCTCAAGCTCGAGTCAATGGCTATCATCAAGACTTGACAGCCAAGGAGATGCACTTCTGCTAGAAGAAGCTGATTTAGTGGGTATTGAGAAGCCCAAAAAGCAACTTGGTGATTTGCTTTGCAATGATGAACCAGGTAGGGCTGTGATTCCCATTTGTGGAATGGGAGGGTTAGGGAAAACTACATTGGCAAAACAAGTCTACGATGACCCAAAAGTGAAGAAGCGTTTCAGGATTCATGCTTGGGTTAATGTTTCTCAATCTTTCAAATTAGAAGAGCTCCTGAAAGACTTGGTTCAACAGCTCCATAATGTCATTGGCAAACCAGCTCCGGAAGCAGTTGGAGAAATGAACAGTGACAGGCTTAAAGAGGTGATTAAGAACTTGCTTCAGAGCAGCAGGTACCTCATAGTGCTGGATGATGTATGGCATGTCAAGGTATGGGATTCTGTCAAACTTGCATTGCCTAATAACGACCGTGGCAGCAGAGTCATGCTTACCACACGGAAGAAAGATATAGCTTTGTATTCCTGTGCCCAATTGGGTAAGGACTTCAACCTTGAATTCTTACCCGAGAGAGAAGCTTGGTCTCTTTTTTGTAGGAAAACGTTTCAGGGTAACTCATGCCCTCCTCATCTGGAACAAGTTTGCATGAATGTCTTAAAGATGTGTGGGGGGTTGCCACTAGCAATTGTGGCGATCAGTGGTGCTTTGGCTACAAGAAGCAGGGCAAACATAGAAGAGTGGCAGATGGTTTGCACTAGTTTTGGGTCTGAAATCGAAGGCAACGACAAACTGGAGGATATGAAGAAAGTCCTTTCCCTAAGTTTCAACGAGTTGCCTTATTACCTTAAATCCTGTCTATTGTATTTAAGCATCTTCCCAGAATTTCATGCCATTGAGCGTATGAGATTGATTCGGCTGTGGATAGCTGAAGGGTTTGTCAATGGAGAAGATGGAAAGACACTAGAGGAAGTTGCAGACAGTTACCTCAAGGAGCTAATCAACAGAAGTCTGCTGCAAGTGGTAGCAAAAACCAGTGATGGCAGGGTGAAGACTTGTCGCATGCATGACCTTCTAAGGGAGATTGTCAATTTGAAGTTAAAGGATCAGAACTTTGCAACAATAGCCAAAGAACAAGACATAATCTGGCCAGACAAAGTTCGACGCCTATCAATCATAAACACGTTGCATAATGTACGACAAAACAAGACCATATTCCAACTTCGGTCTCTGCTGATGTTTGCTTTATCAGATCCACTAGAGCATTTCTCTATACATGCGTTATGTTCCACTGGTTTTAAGTTACTGAGGGTGTTAGATTTGCAGGATGCACCTTTGGAGGTTTTTCCTACTGAAATTGTCAACCTTTACCTTCTCAAGTATCTAAGCTTGAAGAATACAAAGGTGAAAAATATTCCGGGTTCAATTAAGAAACTACAGAACTTAGAGACATTAGATCTTAAACATTCCTATGTCACTGAATTGCCAGTTGAAATTGTGGAGCTGCAACGATTACGCCATCTCTTGGTGTATCGATACGAGATTGAATCCTATGCATATTTCCATTCAAGGTATGGCTTCAAGGTGGCTGCTCCAATTGGACAAATGCAATATTTGCAAAAGCTATGTTTCATAGAGGTAGACCAAGGAAGTAAAGCTTTGATGATTGAGTTAGGAAAACTTACTCAACTGAGGAGGCTTGGCATTAGAAAGATGAGGCAAGAAGATGGAGCTGCTTTGTGTTCATCCATTGAGAAGATGATCAATCTCCGATCATTGTCCATAACTGCAATTGAAGATGATGAAATAATTGATATTCACAACATTTCAAGGCCACCTCAGTTTCTTCAGCAGTTATACCTGAGTGGACGGTTAGAGAAGTTTCCTCACTGGATAAGTTCTCTCAAGAATTTGGTGAAGGTGTTTCTAAAATGGAGCCGGTTAGAGGAGGATCCTCTGGTACATCTTCAAGATTTGCCAAACCTAAGACATGTTGAGTTTCTTCAAGTTTATGTTGGCGAGACAATGCATTTCAAGGCTAAGGGATTTCCAAGTCTGAAGGTGTTGGGTCTTGATGATATAAAAGGATTGAAATCTATGATTGTGGACGAGGGAGCAATGCCTGGTCTCAAAAATCTCATCATCCAGCGCTGTGATTTACTGAAGCAGGTACCATTAGGCATTGAACATTTAACTAAACTAAAAACGATAGAGTTTTTTGATATGCCTGAAGAATTGATTGCAACACTGCGTCCAAGTGGAGGCGAGGATTATTGGAGAGTGCAACATGTCCCAGTAGTTTATTCTACGTATTGGAGGGATGGTGGTTGGGATGTCTACTCATTAGAGACTTTAGGTGAGAGAGAGAGTGATTCCAGTCATAGCGCTGCAATCCGAAGTCTTGAACGTCGTATGCTCTGGAAGGTTTAA 2835 0.4176 MADSSVSFLLDKLTSLLQEEVNLQIGVREDVQYIKDELERHKAILRVADSLEDKDPELKAWVKRVRDIAHDMEDSIDEFNLHLVDPHGQGNNSFHKIAFGIKTVKARHRIASDIQSIKSKVEIISQGRPSITGIGSSSSQWLSSRLDSQGDALLLEEADLVGIEKPKKQLGDLLCNDEPGRAVIPICGMGGLGKTTLAKQVYDDPKVKKRFRIHAWVNVSQSFKLEELLKDLVQQLHNVIGKPAPEAVGEMNSDRLKEVIKNLLQSSRYLIVLDDVWHVKVWDSVKLALPNNDRGSRVMLTTRKKDIALYSCAQLGKDFNLEFLPEREAWSLFCRKTFQGNSCPPHLEQVCMNVLKMCGGLPLAIVAISGALATRSRANIEEWQMVCTSFGSEIEGNDKLEDMKKVLSLSFNELPYYLKSCLLYLSIFPEFHAIERMRLIRLWIAEGFVNGEDGKTLEEVADSYLKELINRSLLQVVAKTSDGRVKTCRMHDLLREIVNLKLKDQNFATIAKEQDIIWPDKVRRLSIINTLHNVRQNKTIFQLRSLLMFALSDPLEHFSIHALCSTGFKLLRVLDLQDAPLEVFPTEIVNLYLLKYLSLKNTKVKNIPGSIKKLQNLETLDLKHSYVTELPVEIVELQRLRHLLVYRYEIESYAYFHSRYGFKVAAPIGQMQYLQKLCFIEVDQGSKALMIELGKLTQLRRLGIRKMRQEDGAALCSSIEKMINLRSLSITAIEDDEIIDIHNISRPPQFLQQLYLSGRLEKFPHWISSLKNLVKVFLKWSRLEEDPLVHLQDLPNLRHVEFLQVYVGETMHFKAKGFPSLKVLGLDDIKGLKSMIVDEGAMPGLKNLIIQRCDLLKQVPLGIEHLTKLKTIEFFDMPEELIATLRPSGGEDYWRVQHVPVVYSTYWRDGGWDVYSLETLGERESDSSHSAAIRSLERRMLWKV* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1806 944 Gene3D - 5 111 - -
Apr7g1806 944 PRINTS Disease resistance protein signature 183 198 - -
Apr7g1806 944 PRINTS Disease resistance protein signature 263 277 - -
Apr7g1806 944 PRINTS Disease resistance protein signature 358 372 - -
Apr7g1806 944 PRINTS Disease resistance protein signature 612 628 - -
Apr7g1806 944 Gene3D - 149 313 IPR027417 -
Apr7g1806 944 SUPERFAMILY L domain-like 489 880 - -
Apr7g1806 944 PANTHER OS08G0539900 PROTEIN 154 907 - -
Apr7g1806 944 PANTHER OS08G0539900 PROTEIN 1 141 - -
Apr7g1806 944 CDD RX-CC_like 2 125 IPR038005 -
Apr7g1806 944 PANTHER DISEASE RESISTANCE PROTEIN RP 1 141 IPR044974 GO:0006952
Apr7g1806 944 PANTHER DISEASE RESISTANCE PROTEIN RP 154 907 IPR044974 GO:0006952
Apr7g1806 944 Gene3D Ribonuclease Inhibitor 521 885 IPR032675 -
Apr7g1806 944 Gene3D - 411 501 IPR036388 -
Apr7g1806 944 Gene3D - 324 410 IPR042197 -
Apr7g1806 944 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 425 IPR027417 -
Apr7g1806 944 Pfam NB-ARC domain 165 412 IPR002182 GO:0043531
Apr7g1806 944 Pfam Rx N-terminal domain 6 93 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1806 Apr-Chr7 25455942 25459188 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1806 158 625 WRKY Transcription Factor Family AT5G45050 21.470 1.46e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1806 K13457 - gmx:100305458 1587.39