Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1794 ATGGGTTACGAAGACGATCCGTATCGCGACGAGGATGGAGAACCCTTGATGGACTACGATGACGTTCAATCCGATCGCGAACCCTCTCCGGAGCCGAACCAGCTCGACGATTTCGACGAAGATGTCGACGATTGGCGCGGTCGTGATCGGTCCCAGACGCCGGTGTACGACACCGATCCGGCGAGGTCGAAGCCGAGAAAGAGGCTAATTAAGAAGAGTGACGCCGGGAAGCAGTCGGTGGCGCCGGAACTCGAGGATGAGGTGGAAGAGGAGGATTTTCCGGCGAGGTCTGAGGAGGGGGATGGGAGGAAGAGGAAGAAGGGGAAGGATGGTGGCAGTGGGAAGAAAGAGAAGAGGCTTAAGGGGGAGAAGAGGTTTGGCGGTGGAAAGGGTGCGTCTAAATTTGGGGCTTCGAAGCAAGGGTTTAGTGGGAAGGCTGGGAAGGACCATGATGGTGAAGTTAAGGAGATGTGGGATACGATTGCTGGTGGGGATTCTGAGGATGATCATGAGGGTGTCAGGAATGTTGATGATGACAACTTTATAGATGACAGTGGAGTGGAGCCTGGTTTTTATCCTAGTGACAATGAGCCACGTTCTCCTGGCGATGCTCCCCAGGCAGAGGAAGGTGAAGAGGATGAAGAAATCAAAGATCTTTTCAAGATGGGTAAAAAAAAGAAAAAGAATGAGAGAAGTCCTGCAGAAATAGCATTATTAGTTGAAAATGTCATGGCTGAGCTTGAGGTTACAGCTGAAGAGGACGCTGAACTTAATAGACAAGGGAAGCCTGCTATTAATAAACTCAAGAAGTTGCCTCTTCTTACAGAAGTCCTCTCAAAGAAACAGCTTCAACTAGAGTTTTTAGATCATGGAGTTCTAACTTTATTGAAGAATTGGCTTGAGCCTCTTCCTGATGGAAGCTTGCCAAATATAAACATACGCACAGAAATTTTGAGGATTTTGAATGATTTTCCTATAGACCTAGAGCAGTATGATAGAAGAGAACAGCTGAAGAAGAGTGGTCTTGGAAAGGTAATTATGTTTTTATCAAAGTCTGATGAAGAAATTAGTGTAAATAGGAAGCTAGCCAAGGATCTGGTTGATAAGTGGAGCCGACCTATATTTAATAAGAGTACACGATTTGAAGACATGAGAAATATGGAGGATGACAGGGTTCCTTTCAGGAGGCCATCAGTTAAAAAGCCGGCCAATAAAGCTGCAGGAATGGAATCCAGAGATAGTGACCTTGACTTGGAACTTTCACAGCCTAGGTCTGGACAGTCATCGTCTAGGCAACATGCATCAAGGCCAGAAGCAACACCCTTGGATTTTGTGATCCGTCCCCAATCTAAAATTGATCCAGAAGAAGTTAGAGCACGAGCAAAACAAATGAATAAGAAATTGCAGCAATTGAGGGCACCCAAAAAAAGGCAGCTTCAAGCTACAAAACTGAGTGTGGAAGGTCGTGGTATGATCAAATATTTGTAA 1488 0.4597 MGYEDDPYRDEDGEPLMDYDDVQSDREPSPEPNQLDDFDEDVDDWRGRDRSQTPVYDTDPARSKPRKRLIKKSDAGKQSVAPELEDEVEEEDFPARSEEGDGRKRKKGKDGGSGKKEKRLKGEKRFGGGKGASKFGASKQGFSGKAGKDHDGEVKEMWDTIAGGDSEDDHEGVRNVDDDNFIDDSGVEPGFYPSDNEPRSPGDAPQAEEGEEDEEIKDLFKMGKKKKKNERSPAEIALLVENVMAELEVTAEEDAELNRQGKPAINKLKKLPLLTEVLSKKQLQLEFLDHGVLTLLKNWLEPLPDGSLPNINIRTEILRILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEISVNRKLAKDLVDKWSRPIFNKSTRFEDMRNMEDDRVPFRRPSVKKPANKAAGMESRDSDLDLELSQPRSGQSSSRQHASRPEATPLDFVIRPQSKIDPEEVRARAKQMNKKLQQLRAPKKRQLQATKLSVEGRGMIKYL* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1794 495 PANTHER PROTEIN IWS1 HOMOLOG 1 1 495 - -
Apr7g1794 495 Pfam TFIIS helical bundle-like domain 321 374 IPR017923 -
Apr7g1794 495 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 289 377 IPR035441 -
Apr7g1794 495 ProSiteProfiles TFIIS N-terminal domain profile. 294 377 IPR017923 -
Apr7g1794 495 MobiDBLite consensus disorder prediction 1 215 - -
Apr7g1794 495 MobiDBLite consensus disorder prediction 1 18 - -
Apr7g1794 495 PANTHER PROTEIN IWS1 HOMOLOG 1 1 495 IPR044204 GO:0009742|GO:0032784
Apr7g1794 495 Coils Coil 240 260 - -
Apr7g1794 495 MobiDBLite consensus disorder prediction 420 436 - -
Apr7g1794 495 MobiDBLite consensus disorder prediction 41 64 - -
Apr7g1794 495 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 233 380 IPR035441 -
Apr7g1794 495 MobiDBLite consensus disorder prediction 144 181 - -
Apr7g1794 495 MobiDBLite consensus disorder prediction 19 33 - -
Apr7g1794 495 MobiDBLite consensus disorder prediction 96 128 - -
Apr7g1794 495 MobiDBLite consensus disorder prediction 392 453 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Apr7g1794 Med26 2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1794 K17498 - gmx:100801805 796.964