Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1785 ATGGCAACAACAGAAGCAGAAGCAGAAGCACTGCGCCTCAAGGCTATGACAGAAGCCAAATTCAAATCCTCCAAAAACGCCAAATCAGCTCTGAAGTACGCGAAGCGAGCCCAGCGTCTCGCTCCTCACCTCGCCGGCGTCTCCGAGACCGTCACCTCTCTCACCGTCCTCGCCGCCACCGATTGGTATACCGTTCTCGGCGTTGAACCCTTCTCCAACACCACTACCATTCGCAAACACTACAAGAACCTCGCTCTCCTTCTCCACCCCGACAAAAACTCCCACGTGGCATCCGAGGAAGCATTCAAGCTCGTCGGCGAGGCCTTCCACTTTCTCTCCGACAGGGTTCGCCGGAGGAACTACGATGCCGAGCTTCGGCAGAGGATTGAGGCAGAAAGCGAGACATTCTGGACCGCTTGCTCCACTTGCAGGCTCTTGCACCAGTTTGAGAGAAGGTACTTGGGTCAAAATCTAGTGTGTCCTAGTTGTGACAAGAGTTTTAAGGCCGTTGAAGCTGTTCAGAGTGATGAGTCTGGGGAAGCTAGGGTTAGGAGTAGGAGGTTGGGATTGAAAGAGAGGAAGGGGACTATGGGTAGTGAAAAAAGTGAGAGCTTGAGAGGTAAAGTTGGGGGTGATGAAGTGGGAAATGAGAGGGAAGGGAGATTGAGGAAGAGAATGCGTTCTGTTGGGGAGGTTTTGGAGAGGTCTAAGGCTAAGAGGGTTAAAACTGGTGAGGAAATGATGACATTGGCTGAATTTCAGAATGAAGTGAAGAGAAAAGCGATGCAAAAGAAGCTGAAGGAAAAGGAAAAGGAGGAAGAGGATAGAACAGAGAAGAGGAGCAACCAAGAGGGGAGATTGCGGGGATTGAAGAACAATGAGGGTTTAGAGGTAGGGGAAGTTAGGAGTTTGAGGAAGAGTGTGAAGCCTACAATCAAGGAGAAGCATGAGGATTCTGAGAAGAGAAAGGGGTTGAGAGTTGGGAAGCCTAGGGATTCTAGTGGAGGGGAATTGGAAGTTATGGCGGTGGTGGATTCAGACTTTTATGACTTTGACACAGATAGAGTAGAGAGAAGCTTTAAGAAAGGCCAGGTGTGGGCGGTGTACGACGATGATGATGGAATGCCCAGGCATTATGCCTTGATTGATGAGACTGTTTCAGTGAATCCTTTTGAAGTGAAAATAAGTTGGTTGGACTTACAGAACAATGGGGATGGAAAGATTGTTAGCCGGAACAAAACGGGTTTTCATGTATCTTGTGGGAGATTTAAAGTAGTTAACAGGAAGGCCTCCATAAATTCAGTAAATATCTTCTCTCATGTTGTAGATTGTGACCGGGCAGCGCGCGAGGTTTACAAAGTTTACCCCAAGAAGGGTTCAGTATGGGCACTTTATGGAGAGGCAACTCTTGATGCAGGTGGAAGAAATTTTACTCAGGAGGACAAGAGATGCTATGACATAGTTGTATTTTTGACCAGTTACAGTGAGATCAATGGCCTGAGCATGGCTTATCTTGAGAAGGTTGATGGCTACAAGACAGTATTTAAGAGACAAGAGAAGGGGAGTCATGCCATTAGATTTCTAGGGAAGGATGATATGTGGTTAGTTTCTCATCAAATTCCTGCACGGAAACTTCCTTGTGATGAAACTCCTGAACTGTTGAAAGACTGCTGGGAACTTGATCCTGCTTCACTTCCTTCAGATTTACTTACTATTGGTGGCATAGATAATTAA 1734 0.4706 MATTEAEAEALRLKAMTEAKFKSSKNAKSALKYAKRAQRLAPHLAGVSETVTSLTVLAATDWYTVLGVEPFSNTTTIRKHYKNLALLLHPDKNSHVASEEAFKLVGEAFHFLSDRVRRRNYDAELRQRIEAESETFWTACSTCRLLHQFERRYLGQNLVCPSCDKSFKAVEAVQSDESGEARVRSRRLGLKERKGTMGSEKSESLRGKVGGDEVGNEREGRLRKRMRSVGEVLERSKAKRVKTGEEMMTLAEFQNEVKRKAMQKKLKEKEKEEEDRTEKRSNQEGRLRGLKNNEGLEVGEVRSLRKSVKPTIKEKHEDSEKRKGLRVGKPRDSSGGELEVMAVVDSDFYDFDTDRVERSFKKGQVWAVYDDDDGMPRHYALIDETVSVNPFEVKISWLDLQNNGDGKIVSRNKTGFHVSCGRFKVVNRKASINSVNIFSHVVDCDRAAREVYKVYPKKGSVWALYGEATLDAGGRNFTQEDKRCYDIVVFLTSYSEINGLSMAYLEKVDGYKTVFKRQEKGSHAIRFLGKDDMWLVSHQIPARKLPCDETPELLKDCWELDPASLPSDLLTIGGIDN* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1785 577 SUPERFAMILY Chaperone J-domain 53 126 IPR036869 -
Apr7g1785 577 ProSiteProfiles dnaJ domain profile. 61 125 IPR001623 -
Apr7g1785 577 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 6 573 - -
Apr7g1785 577 Gene3D DnaJ domain 48 143 IPR036869 -
Apr7g1785 577 SMART dnaj_3 60 117 IPR001623 -
Apr7g1785 577 MobiDBLite consensus disorder prediction 261 333 - -
Apr7g1785 577 Pfam DnaJ domain 61 122 IPR001623 -
Apr7g1785 577 Pfam Domain of unknown function (DUF3444) 340 546 IPR024593 -
Apr7g1785 577 PRINTS DnaJ domain signature 63 81 IPR001623 -
Apr7g1785 577 PRINTS DnaJ domain signature 81 96 IPR001623 -
Apr7g1785 577 PRINTS DnaJ domain signature 97 117 IPR001623 -
Apr7g1785 577 Coils Coil 250 282 - -
Apr7g1785 577 MobiDBLite consensus disorder prediction 181 220 - -
Apr7g1785 577 PANTHER BNAC03G44070D PROTEIN 6 573 - -
Apr7g1785 577 CDD DnaJ 61 114 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1785 Apr-Chr7 25205001 25207264 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1785 8 174 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.934 1.18e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1785 - - aprc:113869037 1111.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1785 7 25205001 25207264 Apr7g1785 7 25205001 25207264 ECH
Apr3g0408 3 7929956 7934947 Apr7g1785 7 25205001 25207264 PCT