Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1778 ATGTATGGGGATTGCCAAGTTATGTCAACTATGGGAGGGAACGTAGTAGTAAACTCAGATACCCTCTTCTCTTCCTCGATCCAGAACTCTAACTTCAACTTCATCCCTACCATGCCTTTTCAGCCTTTTCCTACCATGAAAGAAGAAGATGGGATCTTGCGAGGGAAGGAAGAGATGGATAGTGGGTCAGGTAGTGAACATGTTGAAGACAAGTCAGGGAATGAGCAAGAGAGTGAACAACCTACAAAGAAGAAACGTTATCATAGGCACACTGCACGCCAGATCCAAGAAATGGAAGCTTTGTTCAAGGAATGTCCACACCCGGATGATAAGCAGAGGTTGAAACTGAGCCATGAACTGGGCCTGAAACCGCGCCAGGTTAAGTTCTGGTTTCAGAATCGCCGAACCCAGATGAAGGCACAACAAGATCGGGCAGATAATGTGATACTTAGAGCCGAGAACGAGACTCTAAAGAATGAGAACTATCGGTTACAAGCAGCGCTACGTAATATTATCTGTCCCAACTGTGGTGGCCCATGCATAATGGGCGCTGATCTGGGCTTGGATGAACAACAGCTTCGCCTTGAAAATGCCCGGTTAAGAGAAGAGTTAGAACGTGTTTGTTGTCTCACTTCAAGATATACTGGTCGTCCAATCCAAACAATGACAGCAGCACCTACTCTCATGGCTCCATCATTGGATTTGGACATGAACATATACCCACGTCACTTTACGGATCCTCTTGCTCATTGTGCTGAAATGATTCCTGTGCCAATGTTACCTCCCGAAGCTTCACCATTTGCAGAGGATGGTGTCTTAATGGAAGAAGAAAAGTCTCTGGCCTTGGAGCTTGCAGCATCTTCCATGGCTGAGCTTGTGAAGATGTGTCAGACAAACGAGCCACTTTGGATCCGAAGCAGCGAAAATGAAAGGGAAGTGCTTAATTTTGATGAACACGCAAGGCTTTTCTCATGGCCTCTGAATCTCAAGCACCGAAGTGAACTAAGGACAGAAGCTAGCCGTGACACTGCTGTGGTTATAATGAATAGTGTCACTCTTGTTGATGCTTTCCTTGATCCTCAAAAATGGATGGAGTTGTTTCCTACAATCGTTTCTAGAGCAAAAATTGTCCAAATTATATCTTCTGGCGCTTCTGGTCATGCAAGCGGGACTCTTCAGCTGATGTACGCAGAGTTTCAAGTTCTTTCTCCTTTGGTGTCAACTCGCGAGACTCATTTTCTTCGGTATTGTCAACAAAATGCTGAGGAGGGAACCTGGGCCATTGTTGATTTTCCTGTTGATACCTTTCACCATAATTTTCACCCTTCTTATCCTAGATACTATAGGAGGTCCTCTGGCTGTGTGATTCAAGATATGCCAAATGGGTATTCAAGGGTAACTTGGGTTGAGCATGCAAAAGTAGAAGAGAAACCAGTGCATCAGATATTCTGCAACTATGTCTACAATGGAATGGCATTTGGAGCACGTCGCTGGTTAGGGGTTTTGCAAAGACAATGCGAGAGGGTCGCCAGCCTCATGGCCAGAAACATATCAGATCTTGGAGTGATACCTTCACCAGAAGCACGAAAGAACTTGATGAAACTAGCACAAAGAATGATAAAAACGTTTAGCCTTAACATGAGCACTTCGGGGGGTCAATCGTGGACGGCTATATCAGATTCACCTGAAGACACTGTTAGAATCACAACTAGGAAAATCACAGAGCCTGGCCAACCTAATGGTGTGATTCTAAGTGCAGTTTCAACCACTTGGCTTCCCTATTCTCATACCAAAGTCTTTGATCTCCTCAGGGACGAACGCCACAGATCTCAGATGGATGCTCTTTCCAACGGCAACTCATTGAATGAAGTGGCTCATATTGCAAATGGCTCACATCCAGGAAACTGCATTTCCCTTCTTCGCATAAATGTAGCCAGCAACTCATCCCAAAACGTAGAGCTAATGTTGCAAGAGAGTTGCACCGATCAGTGTGGAAGCTTAGTAGTGTACACCACCATCGATGTGGATTCGATCCAGCTAGCGATGAGTGGGGAGGATCCATCATGCATTGCCCTTCTTCCACAAGGGTTCATGATAGTCCCAATGGTATCATCATCAGGGAATGATGATGCCAATTCATCTGCCAATTCAGGTTGCCTTCTAACCATGGGTCTCCAAGTTCTCGCAAGCACAATCCCTTCTGCAAAACTCAACCTTTCAAGCGTTACGGCCATCAACAACCACCTTTGCAACACCTTGCACCAAATCGAAGCTTCCCTTTCTAGCTGCCATGAGAATGGAACTTTTGTTGGGTCTTGCACTGAACCCACCACTAGTGCTCCCTCAAAGCAATGA 2355 0.4552 MYGDCQVMSTMGGNVVVNSDTLFSSSIQNSNFNFIPTMPFQPFPTMKEEDGILRGKEEMDSGSGSEHVEDKSGNEQESEQPTKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSHELGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAENETLKNENYRLQAALRNIICPNCGGPCIMGADLGLDEQQLRLENARLREELERVCCLTSRYTGRPIQTMTAAPTLMAPSLDLDMNIYPRHFTDPLAHCAEMIPVPMLPPEASPFAEDGVLMEEEKSLALELAASSMAELVKMCQTNEPLWIRSSENEREVLNFDEHARLFSWPLNLKHRSELRTEASRDTAVVIMNSVTLVDAFLDPQKWMELFPTIVSRAKIVQIISSGASGHASGTLQLMYAEFQVLSPLVSTRETHFLRYCQQNAEEGTWAIVDFPVDTFHHNFHPSYPRYYRRSSGCVIQDMPNGYSRVTWVEHAKVEEKPVHQIFCNYVYNGMAFGARRWLGVLQRQCERVASLMARNISDLGVIPSPEARKNLMKLAQRMIKTFSLNMSTSGGQSWTAISDSPEDTVRITTRKITEPGQPNGVILSAVSTTWLPYSHTKVFDLLRDERHRSQMDALSNGNSLNEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDQCGSLVVYTTIDVDSIQLAMSGEDPSCIALLPQGFMIVPMVSSSGNDDANSSANSGCLLTMGLQVLASTIPSAKLNLSSVTAINNHLCNTLHQIEASLSSCHENGTFVGSCTEPTTSAPSKQ* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1778 784 PANTHER - 59 768 - -
Apr7g1778 784 SMART START_1 283 508 IPR002913 GO:0008289
Apr7g1778 784 Gene3D - 69 152 - -
Apr7g1778 784 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 59 768 IPR042160 -
Apr7g1778 784 ProSiteProfiles 'Homeobox' domain profile. 81 141 IPR001356 GO:0003677
Apr7g1778 784 MobiDBLite consensus disorder prediction 56 84 - -
Apr7g1778 784 SMART HOX_1 82 145 IPR001356 GO:0003677
Apr7g1778 784 Gene3D - 285 491 IPR023393 -
Apr7g1778 784 SUPERFAMILY Bet v1-like 526 757 - -
Apr7g1778 784 SUPERFAMILY Homeodomain-like 73 142 IPR009057 -
Apr7g1778 784 ProSitePatterns 'Homeobox' domain signature. 116 139 IPR017970 GO:0000981|GO:0006355
Apr7g1778 784 ProSiteProfiles START domain profile. 274 511 IPR002913 GO:0008289
Apr7g1778 784 Pfam Homeodomain 84 139 IPR001356 GO:0003677
Apr7g1778 784 Coils Coil 140 160 - -
Apr7g1778 784 CDD homeodomain 84 142 IPR001356 GO:0003677
Apr7g1778 784 Pfam START domain 284 508 IPR002913 GO:0008289
Apr7g1778 784 CDD START_ArGLABRA2_like 278 507 - -
Apr7g1778 784 SUPERFAMILY Bet v1-like 275 510 - -
Apr7g1778 784 MobiDBLite consensus disorder prediction 56 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1778 Apr-Chr7 25129929 25136114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1778 8 762 Homeobox Transcription Factor Family AT5G46880 56.516 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Apr7g1778 START 3.1e-40 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1778 - - gmx:100812829 1385.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1778 7 25129929 25136114 Apr7g1778 7 25129929 25136114 ECH
Apr7g1778 7 25129929 25136114 Apr6g0737 6 11502973 11509171 ECH