Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1777 ATGGTGGAAAGAAGAGTGACTTTATCAAAGGAAGCTAGAAATGGGTTAGAATTTTCGAAGCGCAAAAGGCTTCAACGTGCAAAATCCGTCACTGCCACCCAGACAAGTATTGCTAATATGATGAACAGAAGCGGAGGAGATGCTTTAAGTGCTTCAGCATCATGTGGCATGAGATTGCATGGTAATGCAGATGCCTTTTTCAAGCGGAAGGTGGATAAGTTTGATACAAGTGATCTGGAATGGACTGATAAAGTTCCGGAGTGTCCTGTGTATTCACCAACAAAAGAGGAATTTGAGGATCCTTTGATTTATTTGCAAAAAATAGCTCCTGAAGCTTCTAAATATGGTATTTGCAAGATTATTTCGCCTTTGAGTGCTTCAGTACCTGCTGGGGTGGTTTTAATGAAGGAGAAAGCAGGATTCAAGTTTACAACTAGAGTGCAGCCCCTTCGCCTTGCTGAATGGGATACTGAAGACAAAGTCACATTTTTCATGAGTGGAAGAAATTATACATTTCGCGATTTTGAGAAAATGGCAAACAAGGTTTTTGCACGAAGATATTGCAGTGCTGGATGTCTTCCTGCCACTTACTTGGAAAAAGAGTTTTGGCATGAAATTGGTTGTGGGAAGATGGAAACTGTTGAATATGCATGTGATGTTGATGGCAGTGCCTTTTCAACTTCACGCACTGACCAGCTTGGTAACAGCAAATGGAATTTGAAGAAACTTTCAAGGTTGCCGAAATCAATTTTACGGCTCTTGGAAACATCAATTCCGGGAGTAACGGAACCCATGCTATACATTGGAATGCTGTTTAGTATGTTTGCTTGGCACGTGGAGGATCATTATTTGTACAGCATTAATTACCATCATTGTGGGGCATCAAAATCATGGTACGGCATTCCGGGTCATGCAGCTCTGGAATTTGAAAGGGTGGTGAGAGAACATGTGTATACTAACGATATTTTGTCAAGTGATGGGGAAGATGGAGCCTTTGATGTTCTACTGGGGAAAACTACACTATTTCCACCAAATATTTTGTTGGAGCATGGAGTCCCTGTTTACAAGGCTGTTCAAAAGCCGGGGGAGTTTATTATAACCTTCCCTAGAGCATATCATGCTGGCTTCAGTCATGGTTTCAACTGTGGAGAAGCAGTGAATTTTGCAATTGGTGATTGGTTTCCTTTAGGGGCTATTGCTAGCAGAAGATATGCGCTTCTTAACAGGGTTCCTTTGCTGCCCCATGAAGAACTTCTATGCAAAGAAGCGATGCTTCTTCATACATGCTTGGAACTTGAAGATTCAGACTTTCCCTCTTCAGACTTGTTTTCTCATAATAGCATTAAGATTTCATTTGTTAATTTGATGCGTTTCCAGCATTGTGCTCGTTGGTTGCTTATGAAATCAAGGGCATGTATAAGTATCTCTTCTCATTCCCATGGCACAATTCTCTGTAGCCTCTGCAAACGTGACTGTTATATAGCTTATGTTGACTGCAACTGTCACATGCATCCTGTATGCCTACGTCATGATGTTGATTCTCTTGACTTCATCTGTGGGAGCAAACACACTCTTTATTTGAGGGATGATATCATGGATATGGAAGCTGCAGCCAAGATGTTTGAACATGAAGATGGGATATTGAATGAGATAAGCAAGCAAACCAAAAGTGACCAAAACATGTATTCATATCCTTTGTCAAACATGTTTCAGAGAGCTGAGGCTAATGGATACACACCTTATTGTGAGCTAAAACTTGACTCTGTTATTGAATTTTACACAACTCCAGAACACTCAACAAATAACAATCAACAAGAGTACAGTACACAGACTCAATCTGTCTTCAGGCATTGCTCTGAAAATCATAAGCCAGTTGTGTCTGAGGTTTCCTTTTCTTCGGCTGCATCCACTCTTTGCTCTCTTTCAGAACCTCTCGAGAGCACATTTGGTCCCAAAAATGTTGAGGGGTATACCGATGCCAATTCAGGCATTGCTGATTTTGAAGATTTTGGTGAAAGAATATCCAACAGTGCATGTGAATCTTCAGTATCCCCTGCTTTGTACCACGAAAGCTCAGTTAAACCGCAAGGTGATGATCTTCAGCGATTTGACACAACGCCCATTGTGGATGAGAATGATGACTCTGATTCAGAAATATTTAGGGTAAAGCGCCCTTCCTCTCTGAAAGCAGAGAGGAGAAGTATGAATGATGCTGTGTCTTCAAAGAATTCTGAGCAGCAGGGACTTAAACGACTGAAGAAAGTCCTTCCCGAAGGAAAAAGTGGGCAACCAATGGGTTTAAGCCGAACCAATGAATCAAGTTACAAATATAGTCACCCTGTTAGCCATAAAATTGATGGCGAAATTTCCTCCAGAGACAGATTTGCAAGGGGTAATGGTATTCCCGTTTCTATAAGATATAGGAAGTTAGGCAACGAGGAAATAAGTATGCAACGAGATCACCACCGGGGAGAGAGGTTGCAGCAAACTCTTAGGGAGCCGCCTTCCATTGAGATGGGGCCAAAGCGCCTTAAAGTTCGAGGCCCTTCATTTTTAGGCTTAGAGAGCAGATTGAATTGA 2580 0.4167 MVERRVTLSKEARNGLEFSKRKRLQRAKSVTATQTSIANMMNRSGGDALSASASCGMRLHGNADAFFKRKVDKFDTSDLEWTDKVPECPVYSPTKEEFEDPLIYLQKIAPEASKYGICKIISPLSASVPAGVVLMKEKAGFKFTTRVQPLRLAEWDTEDKVTFFMSGRNYTFRDFEKMANKVFARRYCSAGCLPATYLEKEFWHEIGCGKMETVEYACDVDGSAFSTSRTDQLGNSKWNLKKLSRLPKSILRLLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYHHCGASKSWYGIPGHAALEFERVVREHVYTNDILSSDGEDGAFDVLLGKTTLFPPNILLEHGVPVYKAVQKPGEFIITFPRAYHAGFSHGFNCGEAVNFAIGDWFPLGAIASRRYALLNRVPLLPHEELLCKEAMLLHTCLELEDSDFPSSDLFSHNSIKISFVNLMRFQHCARWLLMKSRACISISSHSHGTILCSLCKRDCYIAYVDCNCHMHPVCLRHDVDSLDFICGSKHTLYLRDDIMDMEAAAKMFEHEDGILNEISKQTKSDQNMYSYPLSNMFQRAEANGYTPYCELKLDSVIEFYTTPEHSTNNNQQEYSTQTQSVFRHCSENHKPVVSEVSFSSAASTLCSLSEPLESTFGPKNVEGYTDANSGIADFEDFGERISNSACESSVSPALYHESSVKPQGDDLQRFDTTPIVDENDDSDSEIFRVKRPSSLKAERRSMNDAVSSKNSEQQGLKRLKKVLPEGKSGQPMGLSRTNESSYKYSHPVSHKIDGEISSRDRFARGNGIPVSIRYRKLGNEEISMQRDHHRGERLQQTLREPPSIEMGPKRLKVRGPSFLGLESRLN* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1777 859 MobiDBLite consensus disorder prediction 819 859 - -
Apr7g1777 859 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN 52 855 - -
Apr7g1777 859 PANTHER LYSINE-SPECIFIC DEMETHYLASE 52 855 - -
Apr7g1777 859 SUPERFAMILY Clavaminate synthase-like 166 421 - -
Apr7g1777 859 MobiDBLite consensus disorder prediction 704 738 - -
Apr7g1777 859 ProSiteProfiles JmjC domain profile. 235 405 IPR003347 -
Apr7g1777 859 MobiDBLite consensus disorder prediction 764 778 - -
Apr7g1777 859 SMART JmjN_1 87 128 IPR003349 -
Apr7g1777 859 Pfam JmjC domain, hydroxylase 265 388 IPR003347 -
Apr7g1777 859 Pfam C5HC2 zinc finger 485 536 IPR004198 -
Apr7g1777 859 ProSiteProfiles JmjN domain profile. 88 129 IPR003349 -
Apr7g1777 859 MobiDBLite consensus disorder prediction 689 779 - -
Apr7g1777 859 SMART cupin_9 232 405 IPR003347 -
Apr7g1777 859 Pfam jmjN domain 89 121 IPR003349 -
Apr7g1777 859 Gene3D Cupin 88 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1777 Apr-Chr7 25109895 25115351 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1777 85 423 JUMONJI Transcription Factor Family AT1G30810 35.910 3.28e-63 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Apr7g1777 JmjC 2.3e-39 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1777 - - gmx:100798611 1556.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1777 7 25109895 25115351 Apr7g1777 7 25109895 25115351 ECH