Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1776 ATGGAGCTATTCCCAGCACAACCAGACTTGTCCTTACAAATCAGCCCTCCAAACACCAAACCCACATCAAGTTGGAGAAGAAGCACAGAAGAAGACATGGATTTGGGATTCTGGAAGAGAGCTTTGGACTCTAGAAACTCTCTATCATCAATGGCCAAAACAGACTCTTGCTTCGACCTCTCCCTCTCTAATCCAAAGGTTTCTTCAGACACCAACACCTCCAATCTCATTCACCACTTCCAAAACAGTGGTAATGCGAACAATAATCCCTTTCAATCCTTTCAGCAAAACCATTACTTTCACCACCAACTCTTCCAGCACCACCAGCCACAGCATCAAAGCCTAAGCCAAGAACTGGGGTTTCTCAGACCGATTAGAGGAATTCCAGTGTACCAAAACCCTCCTCCAATACCATTCTCTCAACATCATCATCATCATCCTCTAGAAGCTTCCACCCCCACCCCTTCTTCTATTATTTCCAACACAACCACAGGTTCAAGTTCAACCCCTTTTCACTCTCAAGCTCTGATGAGATCAAGGTTCTTGTCACGCTTCCCTGCTAAACGTAGCATGAGGGCTCCAAGGATGCGTTGGACTACCACCCTCCATGCTCGCTTTGTTCATGCCGTTGAGCTCTTGGGTGGTCACGAAAGGGCTACACCCAAATCAGTTCTTGAGCTAATGGATGTGAAGGATCTCACTTTAGCACATGTTAAGTCTCATTTACAGATGTACCGGACGGTGAAAACTACAGATAGAGCGGCGGCTTCATCAGGGCAATCGGATGTGTATGATAATGGATCATCTGGAGATACTTCTGACGACTTAATGTTTGACATCAACTCCTCAAGAAGGTCTGACCTATCCGTTAAGCAGGGAAGATCAAATGTTAATCAAGATAAAGAATATCATGGGCTTTGGAGCAACTCTTCCAGGGAAGCTTGGTTGCATGGGAAGCCAAAGGCTGATTCTGTTGGAAACGTGCCTTCTCTTGAGGAAATGGATCCAAAGTGCCTAAGCTACGAGAGAATATCAGATGGAAGCTCATCCTCAAACCTTTCAGGATCAAGCCCGAAGAAACCTAATTTGGATTTGGATTTGGATTTGGATTTCAGCTTGGGCCAGCCACTTTAA 1134 0.4541 MELFPAQPDLSLQISPPNTKPTSSWRRSTEEDMDLGFWKRALDSRNSLSSMAKTDSCFDLSLSNPKVSSDTNTSNLIHHFQNSGNANNNPFQSFQQNHYFHHQLFQHHQPQHQSLSQELGFLRPIRGIPVYQNPPPIPFSQHHHHHPLEASTPTPSSIISNTTTGSSSTPFHSQALMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNGSSGDTSDDLMFDINSSRRSDLSVKQGRSNVNQDKEYHGLWSNSSREAWLHGKPKADSVGNVPSLEEMDPKCLSYERISDGSSSSNLSGSSPKKPNLDLDLDLDFSLGQPL* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1776 377 MobiDBLite consensus disorder prediction 135 171 - -
Apr7g1776 377 Pfam Myb-like DNA-binding domain 195 246 IPR001005 -
Apr7g1776 377 MobiDBLite consensus disorder prediction 150 171 - -
Apr7g1776 377 MobiDBLite consensus disorder prediction 343 359 - -
Apr7g1776 377 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 368 - -
Apr7g1776 377 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 368 IPR044847 GO:0000976|GO:0006355|GO:0010158
Apr7g1776 377 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 194 247 IPR006447 GO:0003677
Apr7g1776 377 MobiDBLite consensus disorder prediction 318 377 - -
Apr7g1776 377 MobiDBLite consensus disorder prediction 252 278 - -
Apr7g1776 377 MobiDBLite consensus disorder prediction 1 28 - -
Apr7g1776 377 SUPERFAMILY Homeodomain-like 191 247 IPR009057 -
Apr7g1776 377 Gene3D - 193 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1776 Apr-Chr7 25081488 25086621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1776 1 367 G2-like Transcription Factor Family AT4G17695 39.276 1.58e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr7g1776 Myb_DNA-binding 1.8e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1776 - - aprc:113868756 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1776 7 25081488 25086621 Apr7g1776 7 25081488 25086621 ECH
Apr7g1776 7 25081488 25086621 Apr3g0631 3 15857907 15862969 PCT