Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1769 ATGACATTGGTTATCAGAGAGAGGAGGCACAAGCAAGCTTTAAGGCTTTCCTTACCAAAACCTACAATTCCATCGTCATCATCATCATCATCATCATCTGATATCACACACAAAGCCCACATGCCAGCATTGTTGCCATCTCCATCTTCCCATGTAGACACTTCTCCAGGCATCATCAAGAACCTTTTAGACCTTGAGAAGCTAGTGGTACTTGGCCATGGCAACGGTGGCACAGTCTATAAAGTTTATCACAAGAAGAACAAGTCCTTTTACGCGTTGAAAGTTCTACACTTTAATCAGAATGCCATTGGCATACGTCAACCCGCTACACTAGAGGCTGAGATTCTCAAACGTGTAGATTCCCCATATATAGTAAGGTGCCATGCAGTTTTTGACAATGGTACATGCGGTGAAACTGATAATGGAGGTGGCCTTAGCTTTGTTATGGAATACATGAAAGGAGGGTCCTTGCATGATGTGTTGAGGGAACACCGTAGGTTGCCAGAAGACGTGATATCTGTGTTGGCTAAACGTGTGTTGGAAGGACTCAACTATTTGCATGGCATGCATATTGTGCATAGAGATATTAAACCCTCAAACTTGCTTGTGAATGACAAGGGGGAGGTGAAGATTGCAGATTTTGGAGTGAGTCACGTGGTGGAAGGAAGGTTTGACAGAAATGACTCAAATGCGGGCACGTGTGCCTACATGAGCCCTGAAAGGGTTGATCCAGAGAGATGGGGTGGTGAAAATGCTGATGAGTTTGCAGGTGATGTGTGGTCAATGGGAGTGGTGATGTTGGAATGTCTTTTGGGTTATTTTCCTTTGATCGGTCCTGGGCAAAGACCAGATTGGGCAACTTTGATGTGTGCAATTTGCTTTGGTGAAAAGCTGGACATGCCAAAGAAAGCATCACTCGAGTTCCAAAATTTTGTAGAGAGGTGTCTTGAGAAGGATTGGAGAAAGAGAGCAACAGTGTTAGAGCTTCTTCACCACCCTTTTGTGAGAAGAAACTGTTGCTGTTCCAGTAAAGGGCTTGGCGATTATGTTCTTTGGCGTGAAGTTCATTAG 1071 0.4435 MTLVIRERRHKQALRLSLPKPTIPSSSSSSSSSDITHKAHMPALLPSPSSHVDTSPGIIKNLLDLEKLVVLGHGNGGTVYKVYHKKNKSFYALKVLHFNQNAIGIRQPATLEAEILKRVDSPYIVRCHAVFDNGTCGETDNGGGLSFVMEYMKGGSLHDVLREHRRLPEDVISVLAKRVLEGLNYLHGMHIVHRDIKPSNLLVNDKGEVKIADFGVSHVVEGRFDRNDSNAGTCAYMSPERVDPERWGGENADEFAGDVWSMGVVMLECLLGYFPLIGPGQRPDWATLMCAICFGEKLDMPKKASLEFQNFVERCLEKDWRKRATVLELLHHPFVRRNCCCSSKGLGDYVLWREVH* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1769 356 Gene3D Transferase(Phosphotransferase) domain 1 150 346 - -
Apr7g1769 356 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 5 338 IPR045269 GO:0004674|GO:0006914
Apr7g1769 356 CDD PKc_MAPKK_plant_like 64 336 - -
Apr7g1769 356 ProSiteProfiles Protein kinase domain profile. 65 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1769 356 Pfam Protein kinase domain 66 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1769 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Apr7g1769 356 SMART serkin_6 65 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1769 356 Gene3D Phosphorylase Kinase; domain 1 52 149 - -
Apr7g1769 356 MobiDBLite consensus disorder prediction 19 37 - -
Apr7g1769 356 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Apr7g1769 356 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 10-LIKE 5 338 - -
Apr7g1769 356 SUPERFAMILY Protein kinase-like (PK-like) 69 337 IPR011009 -
Apr7g1769 356 MobiDBLite consensus disorder prediction 17 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1769 Apr-Chr7 25021760 25022830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1769 1 336 MAP Kinase Kinase Gene Family AT1G32320 52.976 6.35e-109 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Apr7g1769 Pkinase 2e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1769 K20604 - gmx:100817973 582.408