Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1768 ATGGACAGTGGTGGTGGCGGCGGCTCTACCCCGGCGGCGGCGATTCCGAACGCGAACGCGCCGCCGCCGTTTCTGAGCAAGACGTACGACATGGTTGACGACCCTTCGACGGACGCGATCGTGTCTTGGAGCGCAACCAACAACAGCTTCGTGGTTTGGGACCCACCCGAATTCGCCAGAGACCTTTTACCCAAATACTTCAAACACAACAACTTCTCCAGCTTCGTTAGACAGTTGAACACTTATGGTTTCAGGAAGGTCGATCCAGATCGCTGGGAATTTGCAAATGAGGGTTTCTTGAGGGGTCAAAAGCACTTGCTTAGGGGTATTACTCGGCGAAAACCTGCTCATGGTCAGAATCATCAACAAGCTCAGCAACCTCATGGACAGGGTTCATCAGTAGGGGCATGTGTAGAAGTTGGGAAGTTTGGGCTTGAGGAAGAGGTTGAGAGGCTTAAAAGAGATAAGAATGTGCTCATGCAAGAGCTTGTGAGGTTGAGGCAGCAGCAACAGACCACTGATAACCAGCTGCAAGCAATGGTTCAGCGCCTTCAGGGAATGGAGCAACGACAGCAGCAAATGATGTCATTCCTTGCAAAAGCTGTCCAGAGCCCTGGCTTCTTTGCTCAGTTTGTACAACAGCAAAATGACAGCAGTAGGCGCATATCTGAAGTCAACAAAAAGCGTCGGCTCAAGCAGGAAGGTGTTGCTGAAACAGAGCGTGCTACTGCTCCTGATGGACAAATTGTTAAATATCAACCTCCTGTGAATGAAGCAGCAAAAGCAATGCTGAGGCAGTTCATGAAATGGGATGCTTCTCGTGTAGAACCTTTTAATAAAAATTCTGATAACTACTTGATTGGTGATGGCTCATCACCGCCTAGTGCAATGGACAGTAGCAGCCCTTCAAGCTGGACTTCTGGGGTAACTCTTCAAGAGGTCCCCCCAACCTCAGTGCAGTCTTCACATATTCCAGCTGCAACTGGGACACAAGGGCATTTCCCCTCCATATGCAAACCTGAAACTCTTTCTGTACCTCAAGCTATGGCTTCTGATCAAGTTAAAAAGGATGGAGCGCATGATGCACCTTGTATCCCTGTTTCTCAAGCAGATGTAGTCATGCCTGATCTTCCTCCAATAACAGAGATGATGACGGGAAACATTCTTGATATTCCTGAAGAAAATTATATGGCTCCTGAGACAGACGAGGGATATATGGATCCTAATTCATTGGGAGTTGGGGGGTCATTTCCCATTGATTTTGAAGGTATTTCACCTGATGCAGACATTGATGATTTTTTAAACAATCCTTCTATTTGGGATGATCTTTTGCAAACTCCAGTTCCAGAGGAACTTGAGACCAGTGTTGCTGAAGTATCCAAAGGGAATGAGGTGCAGCCAACGAAAAATGGATGGGACAAAACTCAACATATGGATCAACTTACAGAGCAGATGGGTCTTCTTTCTTCTGATGCAAAAAGGGTTTGA 1488 0.4711 MDSGGGGGSTPAAAIPNANAPPPFLSKTYDMVDDPSTDAIVSWSATNNSFVVWDPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLRGITRRKPAHGQNHQQAQQPHGQGSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQTTDNQLQAMVQRLQGMEQRQQQMMSFLAKAVQSPGFFAQFVQQQNDSSRRISEVNKKRRLKQEGVAETERATAPDGQIVKYQPPVNEAAKAMLRQFMKWDASRVEPFNKNSDNYLIGDGSSPPSAMDSSSPSSWTSGVTLQEVPPTSVQSSHIPAATGTQGHFPSICKPETLSVPQAMASDQVKKDGAHDAPCIPVSQADVVMPDLPPITEMMTGNILDIPEENYMAPETDEGYMDPNSLGVGGSFPIDFEGISPDADIDDFLNNPSIWDDLLQTPVPEELETSVAEVSKGNEVQPTKNGWDKTQHMDQLTEQMGLLSSDAKRV* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1768 495 Gene3D - 17 114 IPR036388 -
Apr7g1768 495 PRINTS Heat shock factor (HSF) domain signature 24 47 IPR000232 GO:0003700|GO:0006355|GO:0043565
Apr7g1768 495 PRINTS Heat shock factor (HSF) domain signature 62 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Apr7g1768 495 PRINTS Heat shock factor (HSF) domain signature 75 87 IPR000232 GO:0003700|GO:0006355|GO:0043565
Apr7g1768 495 SMART hsfneu3 20 113 IPR000232 GO:0003700|GO:0006355|GO:0043565
Apr7g1768 495 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 10 481 IPR027725 -
Apr7g1768 495 MobiDBLite consensus disorder prediction 116 132 - -
Apr7g1768 495 MobiDBLite consensus disorder prediction 114 133 - -
Apr7g1768 495 Coils Coil 142 169 - -
Apr7g1768 495 Pfam HSF-type DNA-binding 24 113 IPR000232 GO:0003700|GO:0006355|GO:0043565
Apr7g1768 495 ProSitePatterns HSF-type DNA-binding domain signature. 63 87 IPR000232 GO:0003700|GO:0006355|GO:0043565
Apr7g1768 495 SUPERFAMILY "Winged helix" DNA-binding domain 19 113 IPR036390 -
Apr7g1768 495 MobiDBLite consensus disorder prediction 280 312 - -
Apr7g1768 495 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1 10 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1768 Apr-Chr7 25008671 25015567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1768 3 489 HSF AT1G32330 55.090 2.19e-174 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Apr7g1768 HSF_DNA-bind 1.2e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1768 K09419 - gmx:100815121 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1768 7 25008671 25015567 Apr7g1768 7 25008671 25015567 ECH