Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1763 ATGTCAGACCGGGGTCCCTTCTCCGGCGACTCGGCCGTGGATGCTAAGGAAGGACACAAGAGAAAAAAGGAACACAAAGTTCCTTTGTTGAAGCTGTTCTCTTTTGCCGACTTTTATGACTATGTCTTAATGGCTATTGGATCTCTTGGGGCATGTGTTCATGGTGCTTCTGTTCCTGTTTTCTTTATCTTCTTTGGAAAGTTGATCAATGTCATTGGCTTGGCTTATCTTTTCCCCAAGGAAGCTTCTCACAAAGTTGCCAAGTACTCGTTGGATTTTGTGTATCTAAGTGTAGCAATATTATTTTCATCTTGGACAGAGGTGGCATGTTGGATGTACACTGGGGAGCGTCAAGCGGCAAAGATGAGAATGGCTTATTTAAAGTCAATGCTGAATCAAGATATAAGCCTATTTGATACCGAGGCATCAACCGGAGAAGTCATTTCTGCCATTACAAGTGACATTATCATTGTTCAAGATGCACTATCCGAGAAGGTAGGAAATTTCATGCACTACATAAGCAGATTTATTGCGGGCTTTATCATTGGTTTTGTAAGAGTGTGGCAGATCAGTTTAGTGACACTTTCAATTGTCCCCTTGATTGCCCTTGCTGGAGGTCTTTATGCATACGTTACAATTGGACTTCTTGCAAAAGTTCGAAAGGCCTACGTGAGGGCCGGTGAAATTGCTGAAGAGGTCATAGGCAATGTTAGAACAGTACAAGCATTTGCAGGAGAAGAAAGAGCAGTGAGATCATATAAAGCAGCTCTCATGAAAACTTACACGAATGGTCGAAAAACAGGTTTAGCAAAGGGTTTGGGACTGGGCTCAATGCATTGTGTCCTTTTTCTATCGTGGGCTTTGCTTGTTTGGTTCACCAGCATTGTTGTTCACAAGAATATTGCCAATGGAGGCGAATCTTTCACTACCATGCTCAATGTTGTGATCGCCGGCCTGTCACTTGGGCAGGCAGCACCAGATATTACTGCATTCATTAGAGCAAAGGCAGCAGCTTATCCCATTTTTGAGATGATAGAGAGGGACACGATAAGCAAAAGTAGCTCAAAAACTGGTCGCAAGTTAAGCAAATTGGAGGGTCATATCCAGTTTAAGAATGTCTGTTTTAGTTACCCTTCTCGTCCAGATGTAGTAATCTTCAACAACCTATGTCTTGACATTCCTTCAGGAAAAATAGTAGCCCTTGTGGGAGGAAGTGGTTCTGGAAAGAGCACTGTCATATCATTGATTGAACGATTTTATGAACCCCTTTCTGGTCAGATACTATTAGATAGGAATGATATCAAAGAGCTTGATCTCAAATGGCTTAGGCAGCAAATTGGATTGGTGAATCAAGAGCCTGCCCTTTTTGCTACAAGCATCAAGGAGAACATACTGTATGGAAAAGATGATGCCACTCTTGAGGAACTAAAACGAGCTGTGAAGCTTTCAGATGCTCAATCTTTCATTAACAATCTTCCGGATAGATTAGAGACTCAGGTTGGAGAGAGAGGGATACAACTCTCAGGAGGGCAAAAACAAAGGATTGCAATATCTCGTGCTATAGTGAAGAATCCATCAATCCTTTTGTTGGATGAAGCAACTAGTGCTTTGGATGCTGAGTCTGAGAAGAGTGTACAAGAGGCTCTTGATCGTGTTATGGTCGGTAGAACAACTGTTATAGTAGCACACAGGCTTTCTACCATTAGAAATGCAGATGTGATTGCTGTTGTTCAGGGAGGGAGGATTGTGGAAACTGGTAACCATGAAGAGCTCATCTCCAGGCCAACTAGTGTATATGCATCTCTTGTTCAACTCCAAGAGGCAAGTTCTTTGCATCGCCTTCCATCAGTTGGTCCTAGCATGGGACGGCAATCAAGCATTAGCTACTCAAGAGAATTATCCCGTACAACAACAAGCATTGGTGGTAGTTTTCGATCAGATAAAGAATCTATTGGACGAGTTTGTGCCGATGAAGCAGAAAATGGAAGCAAGAAAAAGCATGTTTCAGCATCAAGATTGTATTCTATGGTTGGTCCTGATTGGTTTTATGGGGTTTTCGGGACCTTGTGTGCATTTGTTGCTGGAGCACAGATGCCACTTTTTGCACTTGGAATTTCTCATGCTCTTGTATCATACTACATGGACTGGGATACAACACGTCATGAAATTAAAAAAATTGCTTTCCTTTTCTGTGGAGCAGCAATTATAACTGTCATTGTCCATGCCATTGAACATCTTTCTTTTGGAATCATGGGCGAGCGACTCACCCTTCGAGTGAGAGAAATGATGTTTTCTGCTATTTTGAAGAATGAAATTGGCTGGTTTGATGATACAAACAACACAAGTTCTATGCTTTCATCGCGTTTAGAAACTGATGCAACGTTATTGCGAACTATAGTTGTTGACCGTTCTACGATTCTGTTGCAAAATATTGGTTTGGTTGTTGCTTCATTTATTATTGCCTTCATCTTGAATTGGAGAATAACACTTGTCGTCATAGCCACATATCCTTTGATCATTAGTGGTCACATCAGTGAGAAACTTTTCATGAAAGGCTATGGTGGCAACTTGAGCAAAGCATATCTAAAAGCTAACATGTTGGCCGGGGAAGCTGTCAGCAATATACGCACTGTTGCTGCATTTTGTTCTGAAGAAAAGGTCCTTGATCTTTACGCTAATGAGCTTGTTGGTCCCTCCAAACGTTCATTTCAAAGGGGTCAAATTGCTGGCATATTCTATGGCATCTCTCAGTTCTTTATTTTCTCATCTTATGGCCTTGCCTTGTGGTATGGATCTGTTTTGATGGAAAAGGAGCTTGCTAGCTTTAAATCGATAATGAAGTCATTTATGGTTTTAATTGTAACAGCACTGGCTATGGGAGAGACTTTGGCACTAGCCCCAGACCTTTTGAAAGGGAATCAAATGGTTGCATCAGTTTTTGAAGTGATGGATAGAAAGTCAGGAATAGTCGGTGATAGTGGAGAAGAGTTGAAGACAGTAGAGGGAACAATTGAGCTCAAAAGAATCCATTTTAGCTATCCTTCAAGACCAGATGTAATTATTTTCAAGGATTTCAATCTAAGAGTTCCTTCAGGAAAGAGTGTTGCCTTAGTGGGGCAAAGTGGTTCTGGTAAAAGCTCTGTGATCTCCCTTATACTCAGATTTTATGATCCAACATCAGGGAGGGTGTTAATTGATGGGAAAGACATCATAAGACTTAATCTGAAATCTCTTAGGAAACATATTGGTCTTGTGCAACAAGAACCAGCTCTTTTTGCAACATCAATTTATGAAAATATTCTTTATGGGAAGGAAGGTGCCTCTGATTCAGAAGTGATTGAAGCAGCTAAGCTTGCTAATGCTCATAACTTTATAAGTGGTCTTCCAGAGGGCTACTCCACCAAAGTAGGTGAAAGAGGAGTGCAACTATCTGGCGGCCAAAGACAAAGGGTGGCCATTGCAAGAGCTGTTTTAAAAAACCCTGAAATCTTGCTATTGGATGAAGCCACAAGTGCACTAGATGTGGAGTCTGAGCGTGTGGTACAACAAGCACTGGACAGATTAATGCAAAACAGAACAACAGTTATGGTTGCACATAGGTTATCCACTATAAGAAATGCAGACCAAATCTCAGTTTTACAGGATGGGAAGATAATTGAGCAAGGGACTCATTCAAGTCTCATAGAGAATAAAAATGGAGCATACTTTAAATTAGTCAATCTTCAACAACAACAACAATTATAG 3744 0.4111 MSDRGPFSGDSAVDAKEGHKRKKEHKVPLLKLFSFADFYDYVLMAIGSLGACVHGASVPVFFIFFGKLINVIGLAYLFPKEASHKVAKYSLDFVYLSVAILFSSWTEVACWMYTGERQAAKMRMAYLKSMLNQDISLFDTEASTGEVISAITSDIIIVQDALSEKVGNFMHYISRFIAGFIIGFVRVWQISLVTLSIVPLIALAGGLYAYVTIGLLAKVRKAYVRAGEIAEEVIGNVRTVQAFAGEERAVRSYKAALMKTYTNGRKTGLAKGLGLGSMHCVLFLSWALLVWFTSIVVHKNIANGGESFTTMLNVVIAGLSLGQAAPDITAFIRAKAAAYPIFEMIERDTISKSSSKTGRKLSKLEGHIQFKNVCFSYPSRPDVVIFNNLCLDIPSGKIVALVGGSGSGKSTVISLIERFYEPLSGQILLDRNDIKELDLKWLRQQIGLVNQEPALFATSIKENILYGKDDATLEELKRAVKLSDAQSFINNLPDRLETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTVIVAHRLSTIRNADVIAVVQGGRIVETGNHEELISRPTSVYASLVQLQEASSLHRLPSVGPSMGRQSSISYSRELSRTTTSIGGSFRSDKESIGRVCADEAENGSKKKHVSASRLYSMVGPDWFYGVFGTLCAFVAGAQMPLFALGISHALVSYYMDWDTTRHEIKKIAFLFCGAAIITVIVHAIEHLSFGIMGERLTLRVREMMFSAILKNEIGWFDDTNNTSSMLSSRLETDATLLRTIVVDRSTILLQNIGLVVASFIIAFILNWRITLVVIATYPLIISGHISEKLFMKGYGGNLSKAYLKANMLAGEAVSNIRTVAAFCSEEKVLDLYANELVGPSKRSFQRGQIAGIFYGISQFFIFSSYGLALWYGSVLMEKELASFKSIMKSFMVLIVTALAMGETLALAPDLLKGNQMVASVFEVMDRKSGIVGDSGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSVALVGQSGSGKSSVISLILRFYDPTSGRVLIDGKDIIRLNLKSLRKHIGLVQQEPALFATSIYENILYGKEGASDSEVIEAAKLANAHNFISGLPEGYSTKVGERGVQLSGGQRQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMQNRTTVMVAHRLSTIRNADQISVLQDGKIIEQGTHSSLIENKNGAYFKLVNLQQQQQL* 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1763 1247 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1004 1240 IPR003439 GO:0005524
Apr7g1763 1247 SUPERFAMILY ABC transporter transmembrane region 32 338 IPR036640 GO:0005524|GO:0016021
Apr7g1763 1247 CDD ABC_6TM_Pgp_ABCB1_D2_like 674 989 - -
Apr7g1763 1247 SUPERFAMILY ABC transporter transmembrane region 666 985 IPR036640 GO:0005524|GO:0016021
Apr7g1763 1247 Pfam ABC transporter transmembrane region 686 957 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr7g1763 1247 Pfam ABC transporter transmembrane region 46 316 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr7g1763 1247 Gene3D ABC transporter type 1, transmembrane domain 31 609 IPR036640 GO:0005524|GO:0016021
Apr7g1763 1247 Gene3D ABC transporter type 1, transmembrane domain 647 994 IPR036640 GO:0005524|GO:0016021
Apr7g1763 1247 Pfam ABC transporter 387 535 IPR003439 GO:0005524
Apr7g1763 1247 Pfam ABC transporter 1023 1171 IPR003439 GO:0005524
Apr7g1763 1247 Gene3D - 995 1247 IPR027417 -
Apr7g1763 1247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 996 1242 IPR027417 -
Apr7g1763 1247 CDD ABC_6TM_Pgp_ABCB1_D1_like 44 341 - -
Apr7g1763 1247 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 368 604 IPR003439 GO:0005524
Apr7g1763 1247 ProSitePatterns ABC transporters family signature. 507 521 IPR017871 GO:0005524
Apr7g1763 1247 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 360 606 IPR027417 -
Apr7g1763 1247 Gene3D - 358 607 IPR027417 -
Apr7g1763 1247 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 20 1244 - -
Apr7g1763 1247 SMART AAA_5 395 596 IPR003593 -
Apr7g1763 1247 SMART AAA_5 1031 1217 IPR003593 -
Apr7g1763 1247 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 20 1244 IPR039421 -
Apr7g1763 1247 CDD ABC_MTABC3_MDL1_MDL2 368 606 - -
Apr7g1763 1247 CDD ABC_MTABC3_MDL1_MDL2 1004 1239 - -
Apr7g1763 1247 ProSitePatterns ABC transporters family signature. 1143 1157 IPR017871 GO:0005524
Apr7g1763 1247 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 45 333 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr7g1763 1247 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 685 971 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1763 Apr-Chr7 24921513 24930035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1763 17 1243 Calmodulin-binding Proteins AT2G36910 50.839 0.0 1229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1763 K05658 - gmx:100819045 2281.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1763 7 24921513 24930035 Apr7g1763 7 24921513 24930035 ECH