Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1757 ATGGCCCCTTCTTTCGACACAAGTACTCAAACAGTATGCGTTATGGATGCTTCCAGCCAGTTCGGCTTCAGCCTAGTCCAGAGACTACTCCAAAGGGGCTACGCCGTCCACGCTTCCCTTCAAAAATATGGGGAAAAAGACCTTTTCAATGGGATTTCTACTGATTCCGATAAGCTCAAGATTTTCCGATCTGATCCATTTGATTACCATAGCATAGTTGACGCACTCAGAGGCTGTTCTGGCTTGTTCTACACATTTGAACCTCCCCTTGATCAACCCGATTATGATGAATACATGGCAGACGTGGAAGTAAGAGCTGCACACAACGTGCTCGAAGCTTGTGCTCAGACAGAAACAATAGATAAAGTGGTTTTCACATCCTCAGCTACCGCAGTTGTTTGGAGGGAGGATCGTAAGACCATGGAATTGGATTTAGACGAGAGACATTGGAGTGATGTCAATTTCTGTCGAAAATTCAAGTTATGGCATGGGGTGTCAAAGACAATGGCAGAGAAGACAGCATGGGCCTTGGCAATGGACAGAGGAGTGAACATGGTGTCCGTAAACGCAGGCTTGTTGATGGCCCACGATCTATCAATTAAAAGTCCTTACTTGAGAGGAGCCGCTGAGATGTACGAGGATGGTGTCTTCGTGACCGTTGATTTGGACTTCTTGGTGGATGCTCACATTTGCGTGTACGAGGATGTCTCATCCTACGGTCGTTATTTGTGCTTCAACCACATCATCAACACCCACGACGACGCCGTTCAGCTCGCCCGCAAGTTGACGCCTTCTGCTTCTTCATCCTTACCTCAAAGCGATGACCATGGTAAGAGTTTTATCGAACAGAGAATAAGCAACAAGAAGTTGAACAAATTGATGGTGGATTTCGAGGCTTGA 900 0.4656 MAPSFDTSTQTVCVMDASSQFGFSLVQRLLQRGYAVHASLQKYGEKDLFNGISTDSDKLKIFRSDPFDYHSIVDALRGCSGLFYTFEPPLDQPDYDEYMADVEVRAAHNVLEACAQTETIDKVVFTSSATAVVWREDRKTMELDLDERHWSDVNFCRKFKLWHGVSKTMAEKTAWALAMDRGVNMVSVNAGLLMAHDLSIKSPYLRGAAEMYEDGVFVTVDLDFLVDAHICVYEDVSSYGRYLCFNHIINTHDDAVQLARKLTPSASSSLPQSDDHGKSFIEQRISNKKLNKLMVDFEA* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1757 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 266 IPR036291 -
Apr7g1757 299 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 298 - -
Apr7g1757 299 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 21 172 IPR002225 GO:0003854|GO:0006694|GO:0016616
Apr7g1757 299 Gene3D - 4 299 - -
Apr7g1757 299 CDD FR_SDR_e 12 295 - -
Apr7g1757 299 PANTHER CINNAMOYL-COA REDUCTASE-LIKE SNL6 5 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1757 Apr-Chr7 24869554 24872492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1757 10 297 Monolignol Biosynthesis Gene Families AT5G58490 31.803 1.20e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1757 - - gmx:100793329 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1757 7 24869554 24872492 Apr7g1757 7 24869554 24872492 ECH