Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1746 ATGGCGTCCGATGCCGACAAGAACACCGTGTTCCGAAAGCTCAAATCAAAGTCCGAAAACAAGATGTGTTTCGATTGTAATGCAAAGAACCCAACTTGGGCCTCCGTCACCTATGGCATCTTCCTCTGCATTGATTGCTCTGCTGTGCATCGCAGTCTCGGCGTCCACATCAGTTTTGTGAGATCTACAAATTTAGACTCATGGAGTCTGGAGCAATTAAGAATGATGAGCTTTGGGGGAAACAGTCGTGCTCAGGTTTTCTTTAAGCAACACGGTTGGACAGATGGTGGTAAAATAGAGGCCAAATATACCTCTAGAGCTGCAGAATTATACAAACAACTTCTTTCAAAGGAAGTAGCTAAAAGTATGGCTGAGGAGGCAGGTTCACCATCATCACCTGTTGCTTTGCAGTCTTCACAAGTTGCTGAGGGACTTCCTAAAATAAGGACCACCGAATTACCAAAAGAAAATACTCATGGGAAGGCTGAAATGCCTGAGAGCACTTCTTCACCCAGAACTTCACATGCAATGGTTTCCACTACAGTCAAGAAACCTATTGGTGCTAAAAAAACTGGGAAGACTGGGGGACTTGGTGCCCGGAAGCTTACTAAAAAGCCAAATGAGTCTCTGTATGAGCAGAAACCAGAAGAACCACCAGCACCAGTTACTTCCTCAACAAACCACAATTTTCTTTCAGGGCCATCATTAACATCTCGGTTTGAGTATGTAGAAAATGTCCAATCATCTGATCTGAATTCTGGAGGTGGGGGCGGCACACATCTGCTTAGTCATGTGTCTGTACCAAAGTCATCAAACTTCTTTGAAGACTTCGGAATGGATAGTGGTCTTCCAAAGAAATCTGGGTCAAATTCCTCAAAAGTGCAAATTCAGGAGTCTGATGAAGCTAGAAGGAAGTTCTCAAATGCTAAATCTATTTCTTCATCCCAATTTTTTGGAGATCAAAACAGAGCTGCAGATGTGGCTGCTCAAGCTACTTTGTCAAAATTTTCAGGTTCAACTGCCATCTCTAGTGCGGATCTTTTTGGTGACTCAACAGATGACTCTTCCATTGATCTTGCTGCTAGCGACCTCCTTAATCGACTATCCTTTCAGCCACAAGATATCTCTTCTCTTAAGAATATTGCCGGAGAGACTGGGAAGAAGCTCAGCTCATTAGCCTCCACTCTCATAACTGATCTTCAAGACCGAATACTCTAA 1218 0.4351 MASDADKNTVFRKLKSKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSLEQLRMMSFGGNSRAQVFFKQHGWTDGGKIEAKYTSRAAELYKQLLSKEVAKSMAEEAGSPSSPVALQSSQVAEGLPKIRTTELPKENTHGKAEMPESTSSPRTSHAMVSTTVKKPIGAKKTGKTGGLGARKLTKKPNESLYEQKPEEPPAPVTSSTNHNFLSGPSLTSRFEYVENVQSSDLNSGGGGGTHLLSHVSVPKSSNFFEDFGMDSGLPKKSGSNSSKVQIQESDEARRKFSNAKSISSSQFFGDQNRAADVAAQATLSKFSGSTAISSADLFGDSTDDSSIDLAASDLLNRLSFQPQDISSLKNIAGETGKKLSSLASTLITDLQDRIL* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1746 405 CDD ArfGap_ArfGap2_3_like 6 121 - -
Apr7g1746 405 Gene3D Arf GTPase activating protein 1 134 IPR038508 -
Apr7g1746 405 MobiDBLite consensus disorder prediction 219 233 - -
Apr7g1746 405 Pfam Putative GTPase activating protein for Arf 9 111 IPR001164 GO:0005096
Apr7g1746 405 MobiDBLite consensus disorder prediction 131 145 - -
Apr7g1746 405 PRINTS HIV Rev interacting protein signature 20 39 IPR001164 GO:0005096
Apr7g1746 405 PRINTS HIV Rev interacting protein signature 39 56 IPR001164 GO:0005096
Apr7g1746 405 PRINTS HIV Rev interacting protein signature 60 81 IPR001164 GO:0005096
Apr7g1746 405 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD9-RELATED 3 405 - -
Apr7g1746 405 SMART arf_gap_3 8 124 IPR001164 GO:0005096
Apr7g1746 405 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 3 405 - -
Apr7g1746 405 SUPERFAMILY ArfGap/RecO-like zinc finger 9 122 IPR037278 -
Apr7g1746 405 ProSiteProfiles ARF GTPase-activating proteins domain profile. 8 126 IPR001164 GO:0005096
Apr7g1746 405 MobiDBLite consensus disorder prediction 163 180 - -
Apr7g1746 405 MobiDBLite consensus disorder prediction 124 233 - -
Apr7g1746 405 MobiDBLite consensus disorder prediction 281 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1746 Apr-Chr7 24752691 24757369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1746 11 89 C2H2 Transcription Factor Family AT4G21160 46.250 8.63e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1746 K12493 K11855 gmx:100785169 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1746 7 24752691 24757369 Apr7g1746 7 24752691 24757369 ECH