Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1745 ATGAATCTGTGGACGGACGATAACTCCTCCGTCATGGAGGCATTCATGTCCTCCTCCGATCTCTCCTCCATATGGCCAGCGCCGGCGCCGCCACAATCCACCGCTGTCTTCAACCAGGACACTCTCCAGCAGCGTCTCCAGGCCCTCATGGAGGGCGCCAGAGAGAGCTGGACCTATGCCATCTTCTGGCAATCCTCCTACGACTACGCCGGCTCCTCACTCCTCGGTTGGGGCGACGGTTACTACAAAGGCGACGACGACAAAGCCAAAGCCAAAGCCAAGGCCAAGGCCACCTCCTACGCCGACCAAGACTACCGTAAAAAGGTCCTCCGCGAACTCAATTCCCTCATCTCTGGCTCCTCCGCCGCCTCCTCCGACGACGTCGACGAAGAGGTCACTGACACCGAGTGGTTTTTCCTCGTTTCCATGACCCAGTCCTTCGTCAATGGCGGCGGGTTGCCCGGTCAGGCCTTCTTCAATTCCGCCCCCGTTTGGGTCACCGGCGCCGACCGTCTCTCCGCCTCGCCGTGCGAGAGGGCGCGGCAGGGACAGGTGTTCGGGCTGCAGACTCTGGTATGCATACCTTCAGCCAATGGCGTCGTTGAACTAGGTTCCACGGAGCTGATTTATCAGAATTCGGATCTGATGAACAAGGTGAAGGTTCTCTTCAATTTCAACAGTAATCTTGATGTGGGTTCGTCGTGGCCGTTAACTGCTAGCACCGCCGATCAAGGCGAGAACGACCCTTCCTCGCTCTGGCTCAGCGATCCCGAAGTTAGGGATTCCGTTAACACCGTTGCTGCTACCCCTTCCGTTTCAGTTTCCGTTTCAATTCCTACCAATCAAGGAATTTCAAAGACGATGCAGTTTGAAACCCCAGGTTCAAGTACTTTAACCGAAACCCCAAGTTCTGTTCACACGATTCACCAACCCTCGCAGAACCAGAGCATCTTCTCCAGGGAATTGAACTTCTCCGAGTACGGTTTCGACGGCAAGAATGGGAACAGTAACCAGCATTCTCTGAAACCAGAATCCGGCGAGATTCTGAGCTTCGGTGAGAGCAAAAGGAATTCTTTCGGCGGCGTGAACGGAAATTCTCATTTCTTCTCCGGCCAGTCGCAGTTCGTTGCGGCTGCTGAAGAGAATAACACCAACACCAACAACGGGAAGAAGAGGTCGCCAAATTCGAGGGGCAGCAACGACGACGGGATGCTCTCCTTCACCTCCGGCGTGATTCTTCCGGCCACGAATTTGAAGTCCACCGGCGGCGGAGGCGGTGATTCCGATCATTCGGATCTCGAAGCTTCTGTGGTGAAGGATCCTGATATCAGCACAGTGGTGGAACCGGAAAAGCGTCCCAGGAAGAGGGGGAGGAAGCCGGCGAACGGAAGAGAGGAACCGTTGAACCACGTGGAAGCAGAGAGGCAGAGGAGAGAGAAGCTGAACCAGAGGTTCTACGCGCTTCGCGCGGTGGTTCCGAACGTGTCAAAGATGGACAAAGCTTCCCTTCTTGGGGACGCAATATCTTACATTACGGAGCTGAAATCGAAGCTTCAAAGCCTGGAATCGGATAAAGATGGGTTGCAGAAGCAACTTGACGCAGTGAAGCAAGAACTTGAGAAAACCACTGAGAACTCTTCTTCTCCTAATCCTACTCCTAATAAGTCATCGAATACCGCCTTAATTGACTTGGATATCGACGTGAAGATTATTGGGTGGGACGCGATGATAAGGATCCAATGCAGCAAGAAGAACCACCCTGCAGCGAGGTTGATGGCAGCGTTGATGGAGTTGGATTTGGACGTGCACCACGCGAGTGTGTCGGTGGTGAATGATTTGATGATCCAACAAGCGACAGTGAAGATGGGGAGTAGGTTTTACACGCAGGAACAGCTTCGGTCGGCACTGTCGTCCAAAGTTGGGGATGTTCGATAG 1935 0.5395 MNLWTDDNSSVMEAFMSSSDLSSIWPAPAPPQSTAVFNQDTLQQRLQALMEGARESWTYAIFWQSSYDYAGSSLLGWGDGYYKGDDDKAKAKAKAKATSYADQDYRKKVLRELNSLISGSSAASSDDVDEEVTDTEWFFLVSMTQSFVNGGGLPGQAFFNSAPVWVTGADRLSASPCERARQGQVFGLQTLVCIPSANGVVELGSTELIYQNSDLMNKVKVLFNFNSNLDVGSSWPLTASTADQGENDPSSLWLSDPEVRDSVNTVAATPSVSVSVSIPTNQGISKTMQFETPGSSTLTETPSSVHTIHQPSQNQSIFSRELNFSEYGFDGKNGNSNQHSLKPESGEILSFGESKRNSFGGVNGNSHFFSGQSQFVAAAEENNTNTNNGKKRSPNSRGSNDDGMLSFTSGVILPATNLKSTGGGGGDSDHSDLEASVVKDPDISTVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKSKLQSLESDKDGLQKQLDAVKQELEKTTENSSSPNPTPNKSSNTALIDLDIDVKIIGWDAMIRIQCSKKNHPAARLMAALMELDLDVHHASVSVVNDLMIQQATVKMGSRFYTQEQLRSALSSKVGDVR* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1745 644 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 42 223 IPR025610 -
Apr7g1745 644 MobiDBLite consensus disorder prediction 538 559 - -
Apr7g1745 644 MobiDBLite consensus disorder prediction 541 559 - -
Apr7g1745 644 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 468 536 IPR036638 GO:0046983
Apr7g1745 644 Coils Coil 511 545 - -
Apr7g1745 644 MobiDBLite consensus disorder prediction 382 475 - -
Apr7g1745 644 Pfam Helix-loop-helix DNA-binding domain 469 514 IPR011598 GO:0046983
Apr7g1745 644 Gene3D - 457 546 IPR036638 GO:0046983
Apr7g1745 644 MobiDBLite consensus disorder prediction 382 424 - -
Apr7g1745 644 MobiDBLite consensus disorder prediction 444 475 - -
Apr7g1745 644 CDD bHLH_AtAIB_like 462 538 - -
Apr7g1745 644 SMART finulus 471 520 IPR011598 GO:0046983
Apr7g1745 644 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 465 514 IPR011598 GO:0046983
Apr7g1745 644 PANTHER TRANSCRIPTION FACTOR MYC2 31 641 - -
Apr7g1745 644 PANTHER MYC 31 641 IPR045084 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1745 Apr-Chr7 24728454 24732292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1745 1 641 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 55.804 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr7g1745 bHLH-MYC_N 7.4e-55 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1745 K13422 - gmx:100790168 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1745 7 24728454 24732292 Apr7g1745 7 24728454 24732292 ECH