Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1735 ATGGTGGTTTTAACTTTTACGGTTTCTCTGTCTGGCTGTTTAGTTCTGTTGTGTATTAGGAGTGTGATGTCATCGCCGGCGGTGGTAACGGAGGAGGAAGGGCGGTGCAAAGGAGAATCTGCTTCTTCACAATCGTTAGATTGTTTCTCCCAGAATGGGGGAGGATTGAAAGAACGGAATTACTTAGGGTTGTCGGATTGCTCATCAGTGGATAGTTGTGCTTCTACTGTCCCAAACTTGTGTGATGAGAAAAAGGGAAATTTGAATTTAAAGGCTACGGAGCTGAGGCTGGGTCTTCCCGGATCCCAATCGCCCGAAAGGGATTCGGATCCGGATCCTTACACTTTAAGCACAGCAAAGCTTGATGAGAAGCCACTGTTCCCCTTGCTTCCTACTAAAGATGGAATATCCTCGTCGTCGCAGAAAGCTGTTGTTTCGGGCAACAAAAGGGGTTTTGATGATACCATGGACGGGTTTTCTCAGGCGAAGTTTACAGGAAATACAGGGATGAACGCAATGCTTTCGCCTAGATCATCTGGAGCTCAGCCTACTGCAATGAAAGAAATGCCTAGCAAGGTGTTGCAAGAAAGGCCTTGTGCAGCTAATGGAACCGGTCATAACCATACAGGTGCTTCAATCAGTGGCTGTGGCCCGGCTTCTAAGGCACAGGTTGTTGGTTGGCCTCCTATAAGATCATTCAGGAAAAATTCGATGGCCAGCACTTCCAAGAACAATGATGAAGTGGATGGAAAACCAGGTCTTGCTGCACTCTTTGTGAAGGTCAGCATGGATGGTGCCCCCTATCTTAGGAAGGTAGATCTAAGAAGTTATACAACTTATCAGGAACTATCTTCTGCCCTTGAAAAGATGTTCAGCTGTTTTACCCTAGGTCAGTGTGGTTCGGATGGAGCACCGGGAAGAGAAGTGTTGAGCGAGAGCAAGCTCAGGGACCTTCTGCATGGTTCAGAGTATGTCCTCACTTATGAAGATAAAGATGGAGACTGGATGCTTGTAGGGGATGTACCATGGGAGATGTTCATTGACACTTGCAAAAGGCTTAAAATCATGAAGGGTTCTGATGCCATTGGCTTAGCTCCCAGGGCCATGGAAAAGTCCAAAAGCAGGTGTTAG 1131 0.4695 MVVLTFTVSLSGCLVLLCIRSVMSSPAVVTEEEGRCKGESASSQSLDCFSQNGGGLKERNYLGLSDCSSVDSCASTVPNLCDEKKGNLNLKATELRLGLPGSQSPERDSDPDPYTLSTAKLDEKPLFPLLPTKDGISSSSQKAVVSGNKRGFDDTMDGFSQAKFTGNTGMNAMLSPRSSGAQPTAMKEMPSKVLQERPCAANGTGHNHTGASISGCGPASKAQVVGWPPIRSFRKNSMASTSKNNDEVDGKPGLAALFVKVSMDGAPYLRKVDLRSYTTYQELSSALEKMFSCFTLGQCGSDGAPGREVLSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKGSDAIGLAPRAMEKSKSRC* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1735 376 Pfam AUX/IAA family 93 367 IPR033389 -
Apr7g1735 376 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 42 369 IPR003311 GO:0005634|GO:0006355
Apr7g1735 376 PANTHER AUXIN-INDUCED PROTEIN 42 369 - -
Apr7g1735 376 SUPERFAMILY CAD & PB1 domains 256 357 - -
Apr7g1735 376 MobiDBLite consensus disorder prediction 96 117 - -
Apr7g1735 376 ProSiteProfiles PB1 domain profile. 256 360 IPR000270 GO:0005515
Apr7g1735 376 Gene3D - 253 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1735 Apr-Chr7 24598085 24602631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1735 258 361 B3 DNA Binding Superfamily AT5G37020 32.692 6.06e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Apr7g1735 AUX_IAA 8e-89 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1735 K14484 - gmx:100785203 606.675