Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1731 ATGGAGCTTTCTCAACTTGGTTTTCTTGATGAACTACTTGCTCCGAGAAAAGACACTTGGAATGCTTTGTCCACTGGCTTGAATGAGTTACTTCCCAGTGGTTGGAGCTTTGACTCTTTTGATGAGAACCAAAGTTTAGCAACTTTGAATCCATCATTTGCTGCATTTTCGACTCCAATAGACCAAAGATTTGAATGTCCTTATGGAAGTGAAACAGCATACCCTTTTGTTGATGGCTTCACATTGCCAGAGCTTGATTCATCATACACTAGGAATGATGAGTCTGCACCACTTTTACCTCAAGAAGATAATCCCTCAATGGAGGATGAAGAGTTTGGCTTTCTGGGTAGCGATAACATGAATTTGGAACAAACAAAAAGTGGCTGCAAAATTGAGGAACAAGTGACAGAGATTCCGGTCTTCAACATGGGCATGTGTGGAGAGAAAAGGCCCAAATCCAAGAAACTAGAAGGGCAGCCTTCAAAGAATCTCATGGCAGAAAGAAGGAGAAGAAAGCGTTTGAATGATCGCCTTTCCATGCTGAGGTCAATAGTCCCTAAGATCAGCAAGATGGACAGGACCTCCATTCTTGGAGATACCATTGATTACATGAAAGAGCTTCTAGAAAGGATAGGTAAGTTGCAAGAAGAAGAGATGGAGGAGGGAACTAATCAGATAAACCTTTTGGGCATTTCTAAGGAGCTGAAGCCAAATGAAGTAATGGTAAGAAATTCCCCCAAGTTTGATGTTGAGAGAAGAGACCAAGACACAAGGATCAGCATCTGCTGTGCCACAAAGCCAGGATTACTGCTGTCAACAGTGAACACCTTAGAAGCATTAGGCCTTGAGATTCACCAGTGTGTTATAAGCAGTTTCAATGATTTTTCAATGCAAGCATCTTGCTCAGAGGCAGTAGAGCAGACAAATTGTATGAGCCCGGAAGATATAAAGCAAGCACTATTCAGAAATGCAGGTTATGGTGGAAGATGTCTCTAG 996 0.4207 MELSQLGFLDELLAPRKDTWNALSTGLNELLPSGWSFDSFDENQSLATLNPSFAAFSTPIDQRFECPYGSETAYPFVDGFTLPELDSSYTRNDESAPLLPQEDNPSMEDEEFGFLGSDNMNLEQTKSGCKIEEQVTEIPVFNMGMCGEKRPKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGKLQEEEMEEGTNQINLLGISKELKPNEVMVRNSPKFDVERRDQDTRISICCATKPGLLLSTVNTLEALGLEIHQCVISSFNDFSMQASCSEAVEQTNCMSPEDIKQALFRNAGYGGRCL* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1731 331 Gene3D - 151 223 IPR036638 GO:0046983
Apr7g1731 331 PANTHER - 2 331 - -
Apr7g1731 331 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 158 207 IPR011598 GO:0046983
Apr7g1731 331 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 218 IPR036638 GO:0046983
Apr7g1731 331 CDD ACT_UUR-ACR-like 257 298 - -
Apr7g1731 331 Pfam Helix-loop-helix DNA-binding domain 164 207 IPR011598 GO:0046983
Apr7g1731 331 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 331 - -
Apr7g1731 331 SMART finulus 164 213 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1731 Apr-Chr7 24556306 24557729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1731 149 331 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 68.852 2.83e-75 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr7g1731 HLH 7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1731 - - gmx:100806571 614.764