Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1727 ATGATTCAAGCCAATGGCCATCGTCTTGAAACAGTGATAGACATAAAGAAACCCGTGAGTTTCACTGGGGGTCTTGCGTTTGAGTGCCTTACGTACACAGTAACAAAAAGGAAGAAGGTTGAGAATAAGTGGTCAAAAGAAGAGGTGGACTTGTTGCATGATATCACTGGCTATGCACCAAAGGGTTGCATCACTGCAGTGATGGGTCCTAGCGGTGCAGGAAAGTCCACTCTTTTGGATGGACTTGCTGGGAGAATTGCAAGTGGGAGCCTTAAAGGGAGGGTGTCTTTGGATGGAACAACAGTGAGTGCAAGTTTGATCAAAAGAACTTCAGCATATATAATGCAAGAAGATAGGCTTTTCCCAATGCTTACTGTCTATGAGACTTTGATGTTTGCTGCTGATTTTCGCCTTGGCCCGCTTTCACTTTCTGATAAGAAGCAGAGGGTCGAGAAGCTTATTGAGCAGCTTGGCTTATCATCATCTCGAAACACGTACATAGGAGACGAAGGGACAAGAGGACTGTCAGGTGGAGAGCGTCGAAGGGTCTCAATAGGGGTAGACATAATCCATGGCCCTTCCCTTCTCTTTCTAGACGAACCAACCTCAGGCTTAGACTCAACAAGTGCTCACAGCGTCATAGAAAAAGTGCACCACATTGCACGTAGTGGCAGCACCGTAATTCTCACCATCCACCAACCCTCATCAAGAATCCAATTGCTTCTCGACCACCTTATCATCCTCGCAAGAGGCCAACTCATGTTCCAAGGTTCTCCCAAAGACGTGTCACTCCACTTGGCTCGCATGTCACTCAAAGTCCCCAAAGGAGAGAACCCCATTGAGCATCTTATTGATGTGATTCAAGAGTATGATCAACGTTGTGATGTTGGTGTTGAGGCTCTTGCTGAGTTTGCACGCACTGGGGTCAAACCTCCTCCTTTGTCTCATTTGGAGCAAGTGTCACTCTCTTCTATTGCACCTTCTCACTCTCATCCAAGCCATGTGTATGAGGATAACTCTCATGACTTCTCTCGCGTGTCACAAGCGAGTAGACGAGTGTTAAATGATTTTGATCATAGCTTGAGAAGTCCATATAACACTTCTATGTCGTGGAGCACTGGTAATAGTGCAGCGTTTCTAAAATTCACTCCTTCAAGACTTAAAAATGATCAGAAGGTCCGGAATCCCGCAAGAAATGCTTCCCCTGGGTACTACCAATACTCAAGTGAAATCATGGCAGCTACTCCAACTCCACACAGCAGTGACTACACAGTGAATGAGAACGATTACCTAACTCCCCAAAATGGCACAAAAGAACACCTTGGCTCAAAATTTGCAAATCCATACTTAGTAGAGACTTGGATCCTCATGCGCCGTAACTTCATTAACATAAGGCGCACCCCTGAACTTTTTCTATCAAGACTAATGGTTCTCACTTTCATGGGCTTCATGATGGCCACTTTGTTCCTTAGACCAAAAGAATCTTTGCAAGGCATCACAAACCGTCTCAGTTTCTTCATCTTCACAGTGTGCCTCTTCTTCTTCTCTTCCAATGATGCTGTCCCAGCCTTCATCCAAGAGAGGTTTATTTTCATAAGGGAAACTTCCCACAATGCTTATAGAGCTTCCTCTTATACCATAGCAAGCCTAATCACTCACATGCCATTCATTGCTCTTCAAGCAGCAGTGTATGCAGTCATTGTTTGGTTTGCTCTAGAGCTTCGAGGCCCTTTCACTTACTTTTTGCTTGTTCTCTTTGTTTCTCTTCTCTCAACCAATTCATTTGTTGTGTTTGTGAGCTCAGTGGTTCCAAACTACATCTTGGGTTATGCTGTGGTTATCGCTTTCACTGCCTTGTTCTTCTTGTTCTGTGGATACTTCTTGAGCAACCATGACATACCCACATATTGGCGTTGGATGAACAAAGTTTCAACCATGACATACCCTTATGAAGGGCTCTTGATGAACCAGTACCAGACCAATGATATCTTTGGGAAAGTTGGTGGTATACCCATTACCGGTTTTGATATCTTAAAAAGTCTTCACATTGGAATTGATGAACATAAGAAGATGACAAATGTGCTTATAATGTTTGGTTGGGCAGTGCTATATAGGATTTTATTTTACTTTGTCCTTCGTTTTGCATCAAAAAATCAGAGGTCGTAG 2166 0.4381 MIQANGHRLETVIDIKKPVSFTGGLAFECLTYTVTKRKKVENKWSKEEVDLLHDITGYAPKGCITAVMGPSGAGKSTLLDGLAGRIASGSLKGRVSLDGTTVSASLIKRTSAYIMQEDRLFPMLTVYETLMFAADFRLGPLSLSDKKQRVEKLIEQLGLSSSRNTYIGDEGTRGLSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHHIARSGSTVILTIHQPSSRIQLLLDHLIILARGQLMFQGSPKDVSLHLARMSLKVPKGENPIEHLIDVIQEYDQRCDVGVEALAEFARTGVKPPPLSHLEQVSLSSIAPSHSHPSHVYEDNSHDFSRVSQASRRVLNDFDHSLRSPYNTSMSWSTGNSAAFLKFTPSRLKNDQKVRNPARNASPGYYQYSSEIMAATPTPHSSDYTVNENDYLTPQNGTKEHLGSKFANPYLVETWILMRRNFINIRRTPELFLSRLMVLTFMGFMMATLFLRPKESLQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTIASLITHMPFIALQAAVYAVIVWFALELRGPFTYFLLVLFVSLLSTNSFVVFVSSVVPNYILGYAVVIAFTALFFLFCGYFLSNHDIPTYWRWMNKVSTMTYPYEGLLMNQYQTNDIFGKVGGIPITGFDILKSLHIGIDEHKKMTNVLIMFGWAVLYRILFYFVLRFASKNQRS* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1727 721 Gene3D - 37 270 IPR027417 -
Apr7g1727 721 Pfam ABC transporter 52 203 IPR003439 GO:0005524
Apr7g1727 721 ProSitePatterns ABC transporters family signature. 175 189 IPR017871 GO:0005524
Apr7g1727 721 SMART AAA_5 61 259 IPR003593 -
Apr7g1727 721 CDD ABCG_EPDR 25 257 - -
Apr7g1727 721 Pfam ABC-2 type transporter 453 658 IPR013525 GO:0016020|GO:0140359
Apr7g1727 721 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 35 275 IPR003439 GO:0005524
Apr7g1727 721 PANTHER ABC TRANSPORTER G FAMILY MEMBER 19 8 715 - -
Apr7g1727 721 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 263 IPR027417 -
Apr7g1727 721 Pfam ABC-2 type transporter 232 288 IPR043926 GO:0140359
Apr7g1727 721 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 8 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1727 Apr-Chr7 24508288 24512058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1727 45 289 Calmodulin-binding Proteins AT2G36910 26.613 4.22e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1727 K05681 - gmx:100804809 1169.84