Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1717 ATGATTGAGAAGAATAAGGCTTTCGGATGGGCTGCAAGGGATCCTTCTGGTGTTCTCTCCCCTTTCAATTTCTCCAGAAGGGAAACGGGTGAAAAAGATGTGGCATTCAAAGTGTTGTATTGTGGGATGTGTCACTCAGACCTCCACATGGCGAAGAACGAATGGGGCTTCTCATTTTATCCATTAGTGCCAGGGCATGAGATAGTTGGGGTAGTGACAGAGGTGGGAAGCGACGTTCAGAAGTTCAAAGTCGGGGACAAGGTGGGTGTGGGATGCATGGTTGATTCCTGCCGGGCATGCCAAAACTGTGTTGACAGTCTTGAGAATTATTGTACACAATATACACTCACATATAATGCCAAATATAGAGATGGCACCGTTACATATGGAGGCTACTCTGACTCAATGGTTGCAGATGAACACTTTGTTGTTCGAATTCCTGATGGCTTACCTCTTGATGTTGCTGCTCCTCTCCTTTGTGCTGGGATCACAGTGTATAGCCCTTTGAGATATTTTGGACTTGACAAGCCTAATCTTCATGTGGGTGTGGTGGGTCTTGGTGGGCTTGGTCATATGGCTGTCAAGTTTGCCAAAGCTTTTGGGGTTAAGGTGACAGTAATCAGTACATCACCCAACAAAAAGGAGGAAGCAATACAACGTTTGGGAGCTGATTCTTTTCTTTTAAGCCGTGACCAAGATCAGATGCAGGGTGCAAAGGGCACATTGGATGGCATTATTGACACGGTTTCTGCAGTTCATCCCCTCTTACCTCTGATTGGTTTACTCAAGTCTCATGGAAAGCTTGTAATGGTTGGTGCACCAGAGAAGCCTCTGGAGCTGCCAGTCTTTCCTTTACTTATGGGGAGGAAGATAGTTGCTGGCAGTTGCATTGGAGGGATGAAGGAGACCCAAGAGATGGTTGATTTTGCTGCTGAACACAGGATAAAACCTGACATTGAGGTCATTCCTATGGACTATGTCAACACAGCAATGGAGCGCCTTCTTAAAGCAGATGTTAAATATCGATTTGTGATTGACATTGGAAACACACTAAAACCGTGCTATTAA 1068 0.4532 MIEKNKAFGWAARDPSGVLSPFNFSRRETGEKDVAFKVLYCGMCHSDLHMAKNEWGFSFYPLVPGHEIVGVVTEVGSDVQKFKVGDKVGVGCMVDSCRACQNCVDSLENYCTQYTLTYNAKYRDGTVTYGGYSDSMVADEHFVVRIPDGLPLDVAAPLLCAGITVYSPLRYFGLDKPNLHVGVVGLGGLGHMAVKFAKAFGVKVTVISTSPNKKEEAIQRLGADSFLLSRDQDQMQGAKGTLDGIIDTVSAVHPLLPLIGLLKSHGKLVMVGAPEKPLELPVFPLLMGRKIVAGSCIGGMKETQEMVDFAAEHRIKPDIEVIPMDYVNTAMERLLKADVKYRFVIDIGNTLKPCY* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1717 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 150 316 IPR036291 -
Apr7g1717 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 65 79 IPR002328 GO:0008270|GO:0016491
Apr7g1717 355 SMART PKS_ER_names_mod 17 345 IPR020843 GO:0016491
Apr7g1717 355 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 4 353 - -
Apr7g1717 355 Gene3D - 161 317 - -
Apr7g1717 355 Pfam Alcohol dehydrogenase GroES-like domain 32 145 IPR013154 -
Apr7g1717 355 CDD CAD1 8 346 - -
Apr7g1717 355 SUPERFAMILY GroES-like 13 177 IPR011032 -
Apr7g1717 355 PANTHER ALDEHYDE REDUCTASE 4 353 - -
Apr7g1717 355 Gene3D - 10 347 - -
Apr7g1717 355 Pfam Zinc-binding dehydrogenase 188 311 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1717 Apr-Chr7 24400970 24410257 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1717 4 353 Monolignol Biosynthesis Gene Families AT4G37990 72.000 3.49e-174 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1717 - K23232 gmx:100816901 625.935