Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1716 ATGTCGAACATGTTAGTAAGAGAAGAAAACGAAAAAATTGGTGCTTATGGGTTGGCTGCTAGAGACACCTCTGGAATTCTCTCTCCGTTCCACTTTACCAGAAGGGCAAATGGGGATAATGATATCACCCTCGACATCCTCTATTCTGGAATTTGCCACTCAGACCTCCACATGGTGAAGAACGAGTTTGGAATGTCCATCTATCCAATGGTTCCTGGGCATGAGATTGTGGGTAAAGTGACAAAGGTGGGTAGCGGAGTCACAAAATTCAGTGTTGGTGACATAGCTGGAGTCGGTGGCGTTGTGGGTTCGTGTGGCTCATGTTCTGACTGCAACAAGGGCTTTTATGTATACTGCCCAAAAATGATTTTAACCTACAGTGCCCAGTACCATGATGGATCAATAACCCAAGGTGGATACTCAGATAAGCTAGTGGTTGACCAAAACTTTGCCGTGCTAATCCCCAAATCACTGCCACTAGATGGTGCAGCCCCGTTGCTATGTGCTGGAATCACAGTGTACAGCCCATTGAAGTATTATGGGCTTACTCAGCCCGGATTGCACTTGGGTGTGGTGGGCCTGGGAGGCCTAGGTCATGTGGCTGTCAAGTTTGCTAAGGCTTTTGATATGCGTGTCACTGTAATTAGTACTTCTCCCATCAAGAAGAAGGAAGCATTGGAAAAGCTTGGTGCCGATTCATTCTTGGTCAGTCAAGACCAACAACAGTTGCAGGATGCCATGGGCACAATGGATGGCATTATTGACACAGTTTCAGCTAATCACTCGGTCCAATCACTAATTGGTTTGTTGAAAACAAGTGGAAAGTTGATTTTGGTGGGTGCACCAACCATGCCTCTTGATGTATTAGCTCTGCCCTTGCTTTTGGGGAGAAAGATGATTGCTGGTAGTGCAGGTGGGGGGAGGGAAGAAATGCAAGAGATGATGAATTTTGCAGCAACACACAATATTACGGCGGATGTGGAAGTTATTCCGATGGACTACGTGAACACTGCTTTTGAGAGACTAAAAAACAATGATGTTAAGTATCGCTTTGTCATTGATGTGGCAAATAGCATAAACTGCATGTCCAATTAG 1095 0.4539 MSNMLVREENEKIGAYGLAARDTSGILSPFHFTRRANGDNDITLDILYSGICHSDLHMVKNEFGMSIYPMVPGHEIVGKVTKVGSGVTKFSVGDIAGVGGVVGSCGSCSDCNKGFYVYCPKMILTYSAQYHDGSITQGGYSDKLVVDQNFAVLIPKSLPLDGAAPLLCAGITVYSPLKYYGLTQPGLHLGVVGLGGLGHVAVKFAKAFDMRVTVISTSPIKKKEALEKLGADSFLVSQDQQQLQDAMGTMDGIIDTVSANHSVQSLIGLLKTSGKLILVGAPTMPLDVLALPLLLGRKMIAGSAGGGREEMQEMMNFAATHNITADVEVIPMDYVNTAFERLKNNDVKYRFVIDVANSINCMSN* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1716 364 Pfam Alcohol dehydrogenase GroES-like domain 40 152 IPR013154 -
Apr7g1716 364 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 2 363 - -
Apr7g1716 364 Gene3D - 169 325 - -
Apr7g1716 364 Gene3D - 19 355 - -
Apr7g1716 364 PANTHER ALDEHYDE REDUCTASE 2 363 - -
Apr7g1716 364 SUPERFAMILY GroES-like 24 186 IPR011032 -
Apr7g1716 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 323 IPR036291 -
Apr7g1716 364 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Apr7g1716 364 Pfam Zinc-binding dehydrogenase 196 319 IPR013149 -
Apr7g1716 364 CDD CAD1 17 354 - -
Apr7g1716 364 SMART PKS_ER_names_mod 25 353 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1716 Apr-Chr7 24393579 24395652 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1716 15 364 Monolignol Biosynthesis Gene Families AT4G37990 63.143 1.04e-152 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1716 - K23232 gmx:100801089 585.874