Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1704 ATGTGGAGAGTGGAGAAGAGCGGGGAAATAGAAGAGAAAGAAAACCCAGAAGTGGCATCAATGGTTAATCGTGGAAAAGTGTCATCGAGCGACGGCGAGACATCTCCGAGAGGGATTCTAGAAGCCCCTGTTTCGGGGGCAGAGTCTGACACCAGTGGAAGCAGCAGTTTCAGCTTGTGTTCGCCGGAGAAGTCGCCGGCGACGAATGGAAAATTGCTTGGATGGGACGGTCAACTCTTGCAATGGAAGGCTATGGTGGACGTCTTCAAGTTCAAGTCCGTACGAAAATTAACGGCCATTCCTCTGTTGACGATGAACCATGATATCTCTCAGAAGAACTTGAAGAGATTGGCTCGTATTCGAAGTGCTGAAGATAGTATCGATATTGGGGCCATTCCCACGAAACCCTCTTGGAGGAACTTCGATTACGCAGAGCTCGCTGCTGCTACTAATGATTTCAGTCCTGAGAACTTGGTTGGGAAAGGTGGTCATGCCGAAGTATACAAAGGACGCTTATCCGATGGTCAAGTTATAGCTGTAAAGAGGTTAATGAAGAATGACAAGGATGCTGCAGACAGAGCAGGTGATTTCTTGACAGAGCTTGGAATCATTGCACACATAAACCACCCAAATGCAACGCATCTTGTTGGGTTTGGGATTGAAGGTGGCCTCTACTTTGTCCTACAATTTGCTCCATATGGAAGCCTTGCTTCTTTGCTTTTTGGTTCTGAATGCTTGGATTGGAAGAAAAGGTTCAAGGTAGCTATTGGGGTGGCAGAGGGATTGCATTATCTCCATAAAGAATGCCCGAGACGAATCATTCATCGAGACATTAAGGCCTCCAACATCTTATTAAATGAAAATTATGAAGCCGAGATTTCAGATTTTGGACTGGCAAAGTGGCTCCCAAATAAGTGGGCAAATCACGTTGTCTTCCCAATAGAAGGCACATTTGGGTATTTGGCTCCAGAGTACTTCATGCATGGAATTGTGGATGAGAAAACTGATGTATTTGCATTCGGGGTTTTGCTATTGGAGCTCATTACAGGACGTCGTGCAGTCGATTCAGACAGTAGGCAAAGTCTTGTTATCTGGGCCAAGCCAATGCTGGATACAAACAATGTAAAGGAAATAGCCGACCCAAGGTTAGGAGAGGAATATGATTCTACTGAAATGAAGCGTGCCATGATGACAGCTAGCATGTGTGTCCACCATGCATCCTCCCAACGTCCATTCATGAATCAGGTTGTGCAACTATTGAAAGGTGAAGAGACAGCTATACAACCGTTGCAAAATTCAGTTTCACAAAAATCACTCTTGTTAGAGGCATGTGACTTAGAAGATTATACATGCTCTAATTACTTGACGGACCTAAATCGCCACAGGCAACTAATCATGGAATGA 1404 0.4501 MWRVEKSGEIEEKENPEVASMVNRGKVSSSDGETSPRGILEAPVSGAESDTSGSSSFSLCSPEKSPATNGKLLGWDGQLLQWKAMVDVFKFKSVRKLTAIPLLTMNHDISQKNLKRLARIRSAEDSIDIGAIPTKPSWRNFDYAELAAATNDFSPENLVGKGGHAEVYKGRLSDGQVIAVKRLMKNDKDAADRAGDFLTELGIIAHINHPNATHLVGFGIEGGLYFVLQFAPYGSLASLLFGSECLDWKKRFKVAIGVAEGLHYLHKECPRRIIHRDIKASNILLNENYEAEISDFGLAKWLPNKWANHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSDSRQSLVIWAKPMLDTNNVKEIADPRLGEEYDSTEMKRAMMTASMCVHHASSQRPFMNQVVQLLKGEETAIQPLQNSVSQKSLLLEACDLEDYTCSNYLTDLNRHRQLIME* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1704 467 MobiDBLite consensus disorder prediction 1 62 - -
Apr7g1704 467 Pfam Protein kinase domain 156 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1704 467 Gene3D Transferase(Phosphotransferase) domain 1 232 440 - -
Apr7g1704 467 MobiDBLite consensus disorder prediction 47 62 - -
Apr7g1704 467 SMART serkin_6 153 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1704 467 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 28 467 - -
Apr7g1704 467 PANTHER OS08G0249100 PROTEIN 28 467 - -
Apr7g1704 467 ProSiteProfiles Protein kinase domain profile. 153 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1704 467 Gene3D Phosphorylase Kinase; domain 1 114 228 - -
Apr7g1704 467 MobiDBLite consensus disorder prediction 1 19 - -
Apr7g1704 467 ProSitePatterns Protein kinases ATP-binding region signature. 159 181 IPR017441 GO:0005524
Apr7g1704 467 SUPERFAMILY Protein kinase-like (PK-like) 137 429 IPR011009 -
Apr7g1704 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1704 Apr-Chr7 24292054 24296859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1704 110 423 Trihelix Transcription Factor Family AT1G70460 42.284 3.47e-70 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Apr7g1704 PK_Tyr_Ser-Thr 9.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1704 - - gmx:100818314 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1704 7 24292054 24296859 Apr3g0722 3 18902041 18905095 PCT