Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1702 ATGGATGCAATCCAAAGAGAGAAAATCTATGTTGCTGTTGGTAATGATGAGGTGGATGGATTTAAGACTTTGAATTGGGTTCTCCAGAAGTGGAATTCTCATCCAATTTCCGTTGTTATTCTCCATGTGACATACAATATTTCCAAGGAGTATGTTTATACACCATTTGGGAAACTTCCAGCAAGATCTGTGAATGAAGAGAAACTAGAAATTCTCAGGAAAAATGACCAAGAGAAAATTAACAAGTTGCTTTCCAAATATATTGCTTTCTGTGGCAAGGTGCCAGCAGAGATTCTCGAAGTTGAGAAATTTGATGAACCTATGCAAAAGCGCATCATAGACTTGATCTTTGGTCTAGGAATAACCAAATTGGTCATGGGATTTTCATTCATGAAGCCCTCCTTGAAATCAAAAGGTGCCATCAGTGGGTTGTTCTATGTTCATCAGCATAAACCTTCCTTTTGTGAATTGTTCATTATTTGTGGAGGGAAACAAGTTTTCCTAAGGGGAAGAAATGATGAGAAAATAATGGAGGATGATCATGGAGTCATGGTTGCAAAGATGAGAGATAAGTTAACTTTTAAAGATTGGCTAGACAAATTGTTCATTGACAAAACCAGTGATTCACAGGATAGAAGTGCATCTCTTTCCTCAACCAATTTGGAGTCTCATGGGAACCAAAATCAATGGGAATTTCATGCACAAGAAATTGAAAATTATTATCAAGAATTGTTGTCTTCGAAGTTGGAGGAAGGAAGCTGCGTGCAAGATAATGACGACTCACGGATTAGTCCAATTGAGCCAGATGTCACTGAACGGGACAAATCTAATATGATGGCAGCAGAGAAAATTGAGATCCTGAAAAATAAGCTGAATGAAGCTCACAAGACCACCCAATTGAAGAGGAAAGAAGCCAAGGATAACATAGAGAGACACGCAAAAGCTGAATGGGCAATTTGTTTATGCAATAGTCGGGCTGAAGAACTTGAAAGTCGAATAAGGGAGGAGGTGATTGGAAGGGAAGAACTGAACAAGGAAGTGGATGCAGAGAAAGAACAAACACAGGAAATGAGAATAGACGTTGAAGAGAGCAAGAGGAGGTTAAGTTCACTGTTGGAACTGCAATCGGAGTTGTCGAATAGGCTTCAAAAATCGACGGTGGCAAAGACACGCGCTGAGACGCAGCTACAGAAGGCGGTGGGAGAGAGAAGCGAGATGGTGAGGGAGATAGAAGAGCTTCGGAGGCAGAGAGATGTGTTGAACAGAAGAATCGAATTCTGCAAACAGAAAGACGCGATTGGAATGGCTGCGAGGTTGAGCGACACGTGTTGTAGTTTCAGGGAGTACTCGGAGGAGGAGCTCAGGTTGGCCACCGATAACTTTTCCGAGCGGCTACGGTTCAAGTCCGGTGGGGATTGGAGCAATGTGTACAGAGGACGTTTCAGCCATTCCACTGTTGCAATCAAGATGCTCCCTTCTCTTTCTTCTTTCTCTCGTCAAGATTTCAAATCCAAGGTGAGGCTTCTTGGGGATATTAGGCAACCTCATCTGGTTGCCATGGTGGGCTTTTGCTCCGAGCCCAAATGTATAGTTTTGGAATACATGCGCAATGGCAGCTTACGTGACATGTTATGTTCTAGGAGGAAAAACCGGGCCTTGAGATGGCACGATCGAATACGAATAGCCACAGAGGTATGTTCAGGCCTGGGCTTTCTCAATGCAGCTAAGCCCAGGCCAGTGATTCATTGTCATTTGACCCCATCCAACGTCCTCCTAGACCGTAATTTGGTGTCGAAGATAACAAATTTTGGGCTTCATGAATGCCATGATGAGAAGTGTAACGTTGAGTCAGATTTACGGGCCATAGGGGTTTTGCTGATGCAGCTTTTGACTGGAAGAAATTGGGCTGGGCTTGTGGAGGAGGCCTTGACAATGGATATGGATAAAGAGGCTTTTGTTAGAGTTCTTGATGAAATGGCTGGACAATGGCCATTGGATCTAGCGAGAGAACTTGCAGGGCTGGCTGAGAGGTGCATGTCCATCAAAAGCAAGCCCAACTCAGAATTGAGCATTGCAAGGGTCTTAGAGGAACTCAATGAGATAAGAAGAAAGGGTAATGAAATAATTGCAAAGGAAGGGCGAAAGGTAATCATTGGTGGATTTATAGATAGAGAGGGTTCAAGTGATGTGCCTAGTGTTTTTCTGTGCCCCATACTTCAGGAGGTAATGAAAAACCCACACGTGGCAGCAGACGGATTTTCCTATGAGCTGGAAGCAATAGAACAGTGGATAAAATCGGGACGTGACACATCGCCAATGACAAATTTGAGGATGAAGCACACATTCCTCACCCCAAATCACACCCTTCGTTCCCTAATTGAGGACTGGCAGACCAATAGATCACCTAGAGTTGGACATTAA 2421 0.4349 MDAIQREKIYVAVGNDEVDGFKTLNWVLQKWNSHPISVVILHVTYNISKEYVYTPFGKLPARSVNEEKLEILRKNDQEKINKLLSKYIAFCGKVPAEILEVEKFDEPMQKRIIDLIFGLGITKLVMGFSFMKPSLKSKGAISGLFYVHQHKPSFCELFIICGGKQVFLRGRNDEKIMEDDHGVMVAKMRDKLTFKDWLDKLFIDKTSDSQDRSASLSSTNLESHGNQNQWEFHAQEIENYYQELLSSKLEEGSCVQDNDDSRISPIEPDVTERDKSNMMAAEKIEILKNKLNEAHKTTQLKRKEAKDNIERHAKAEWAICLCNSRAEELESRIREEVIGREELNKEVDAEKEQTQEMRIDVEESKRRLSSLLELQSELSNRLQKSTVAKTRAETQLQKAVGERSEMVREIEELRRQRDVLNRRIEFCKQKDAIGMAARLSDTCCSFREYSEEELRLATDNFSERLRFKSGGDWSNVYRGRFSHSTVAIKMLPSLSSFSRQDFKSKVRLLGDIRQPHLVAMVGFCSEPKCIVLEYMRNGSLRDMLCSRRKNRALRWHDRIRIATEVCSGLGFLNAAKPRPVIHCHLTPSNVLLDRNLVSKITNFGLHECHDEKCNVESDLRAIGVLLMQLLTGRNWAGLVEEALTMDMDKEAFVRVLDEMAGQWPLDLARELAGLAERCMSIKSKPNSELSIARVLEELNEIRRKGNEIIAKEGRKVIIGGFIDREGSSDVPSVFLCPILQEVMKNPHVAADGFSYELEAIEQWIKSGRDTSPMTNLRMKHTFLTPNHTLRSLIEDWQTNRSPRVGH* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1702 806 ProSiteProfiles U-box domain profile. 729 803 IPR003613 GO:0004842|GO:0016567
Apr7g1702 806 CDD RING-Ubox_WDSUB1_like 734 775 - -
Apr7g1702 806 PANTHER OS02G0152300 PROTEIN 5 799 - -
Apr7g1702 806 Pfam U-box domain 730 800 IPR003613 GO:0004842|GO:0016567
Apr7g1702 806 Coils Coil 326 381 - -
Apr7g1702 806 Gene3D Transferase(Phosphotransferase) domain 1 535 718 - -
Apr7g1702 806 SUPERFAMILY RING/U-box 727 799 - -
Apr7g1702 806 Coils Coil 277 308 - -
Apr7g1702 806 ProSiteProfiles Protein kinase domain profile. 462 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1702 806 Coils Coil 396 430 - -
Apr7g1702 806 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 50-RELATED 5 799 - -
Apr7g1702 806 SMART Ubox_2 733 796 IPR003613 GO:0004842|GO:0016567
Apr7g1702 806 Pfam Protein tyrosine and serine/threonine kinase 471 612 IPR001245 GO:0004672|GO:0006468
Apr7g1702 806 Gene3D Phosphorylase Kinase; domain 1 436 534 - -
Apr7g1702 806 SUPERFAMILY Protein kinase-like (PK-like) 445 680 IPR011009 -
Apr7g1702 806 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 728 804 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1702 Apr-Chr7 24261114 24267044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1702 7 804 U-box Gene Family AT5G65500 49.442 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Apr7g1702 PK_Tyr_Ser-Thr 4e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1702 - - gmx:100786771 1335.86