Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1696 ATGGCTCTTCCTAGTTCCCTGCAGTTGTCCCATGGATTGGGACTGTGCAGGAACCTGGGCTGTAATAACCATTCGCAGTTCATGAAACAGGACTGCAGGGGTTTTCAACACCTTCGTCATATAAACAGAACAACACATACATTATCTTGCAAATCCTGCTCTTTTAAGTGTCATTGTTTTTTAGTGTCTGGCCAACCAAGTGAGCTTCCTGCTGTTAAGGTGGCTGCTACAGTGTTGGCAAGGTCTTGTAATGTGTTACAAAATAGTCCTGTCTTAGTAAAGTTGATTCCTGCAGTTGGCACCATCATTTTTGCAGTGTGGGGTGTAGGTCCATTATTGTTTCAGACAAGGAAATTATTTTTTCAGAAGAGTGATAATAGTTGGAAGAAAAGCTCCACTCATTATATAGTAACTTCCTACATTCGGCCATTACTGTTATGGACTGGAGCAATACTTATTTGCAGAGCATTGGAGCCAGTAATTTTACCTTCAGAATCTGGTCAGGTTGTTAAAGAACGGCTTTTGAATTTTGTAAGATCATTGTCAACTGTATTGGCCTTTGCCTATTGTTTGTCAAGTGTAATTCAACAAGCGCAGAAATTCTTAGCAGAGGGCACTGATGCAAGTGAGGCGAGAAATATGGGATTCCAATTTGCAGGCAAAACTGTTTATTCTGCGGTATGGATTGCTGCCTTTTCATTGTTCATGGAATTGCTGGGCTTCTCCACCCAGAGATGGGTTACTGCAGGAGGTCTTGGGACAGTTTTGTTGACCCTTGCCGGTCGTGAGATATTTACAAACTTCCTTTCGAGCGTGATGATTCATGCAACTCGGCCTTTTGTGGTTAATGAATGGATTCAAACAAAGATTGAAGGATATGAGGTTTCTGGTACTGTCGAGCATGTTGGCTGGTGGTCACCGACAATTATTAGAGGTGAAGATCGTGAAGCTGTTCACATTCCAAACCACAAATTCACAGTGAATGTCGTGCGGAACCTTAGTCAAAAAACACATTGGCGAATCAAAACCCACCTAGCGATTAGTCATTTGGATGTAAATAAGATTAATAACATTGTTGCTGACATGCGGAAAGTATTAGCCAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCACAGGAGAGTGTTTTTGGACAACATAAATCCTGAAAATCAGGCTCTTTTGATTCTGGTGTCTTGTTTCGTTAAGACCTCACATTTTGAAGAGTATCTGTGCGTTAAGGAAGCTATACTATTGGATCTTCTTAGAGTTATTGGCCACCACCGAGCTCGGCTTGCAACACCTGTCCGTACCCTGCAGAAAATATACAGTGATGCTGACTTGGAGAACATACCATTTGCAGATTCCACATTTAGTCGTGGCACTGGAGCAGTATCTAACCGTCCGTTGTTAGTGATTGAATCACCTTACAAAATCAATACAGATGATAAGATGAAAGCTCGATCAGCACGAGCAGCTGTTGATCAAGATAACAAGACAACCATGCGAACCAAACTTGACACCAAGGTTGCATCAATAGGAGAAGCAGACACCAGGGTCAGAGGAGGAACCCAAGACGACTCTGAGGCGGATACCAAAGTTGTGACTTCTAACTCTGACGCAAATCAAAACTCTGGGACGGTTGTGACACCCAGACCTGATCCTGATTTGGTTGAAAACAAGCCACTGAAATCAGATTCAAACAATGCAAATGGGGAGGTGCCAGAAATTTCCTCTAATTCCAAAGCAACTGATTTAGTAGCATCGGATAATTCAGCTCAGAAGGACATTCATGTTAAACAATCCAAGGGTAAGACCATTAAAAACATCGAGCCAAGCATTGACTCTGAAAATGTAGTTTCCACATCATCAACTAGCATTGCCGACAAAGCTGGTGGAGTTCCTATGAATATGCCAACAAAACAGCAAGGGGAAAGGAAACCTGCTGCATCCAGGCCTGTTCTTGAGGACAACATAGTACTAGGTGTTGCATTGGAGGGATCAAAGAGGACCCTTCCCATTGATGAAGAAATTGACAATGTGACACCTCGAGAGGCAAAGGAAATGACTGCATGCCAGGGTGGAAATGGATCTCCAAAGGCACCAGATGGGAATGACAAGTAA 2121 0.4281 MALPSSLQLSHGLGLCRNLGCNNHSQFMKQDCRGFQHLRHINRTTHTLSCKSCSFKCHCFLVSGQPSELPAVKVAATVLARSCNVLQNSPVLVKLIPAVGTIIFAVWGVGPLLFQTRKLFFQKSDNSWKKSSTHYIVTSYIRPLLLWTGAILICRALEPVILPSESGQVVKERLLNFVRSLSTVLAFAYCLSSVIQQAQKFLAEGTDASEARNMGFQFAGKTVYSAVWIAAFSLFMELLGFSTQRWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALLILVSCFVKTSHFEEYLCVKEAILLDLLRVIGHHRARLATPVRTLQKIYSDADLENIPFADSTFSRGTGAVSNRPLLVIESPYKINTDDKMKARSARAAVDQDNKTTMRTKLDTKVASIGEADTRVRGGTQDDSEADTKVVTSNSDANQNSGTVVTPRPDPDLVENKPLKSDSNNANGEVPEISSNSKATDLVASDNSAQKDIHVKQSKGKTIKNIEPSIDSENVVSTSSTSIADKAGGVPMNMPTKQQGERKPAASRPVLEDNIVLGVALEGSKRTLPIDEEIDNVTPREAKEMTACQGGNGSPKAPDGNDK* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1696 706 MobiDBLite consensus disorder prediction 561 592 - -
Apr7g1696 706 MobiDBLite consensus disorder prediction 673 706 - -
Apr7g1696 706 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 1 706 - -
Apr7g1696 706 MobiDBLite consensus disorder prediction 528 549 - -
Apr7g1696 706 MobiDBLite consensus disorder prediction 512 592 - -
Apr7g1696 706 MobiDBLite consensus disorder prediction 512 527 - -
Apr7g1696 706 Pfam Mechanosensitive ion channel 222 427 IPR006685 GO:0016020|GO:0055085
Apr7g1696 706 SUPERFAMILY Sm-like ribonucleoproteins 264 334 IPR010920 -
Apr7g1696 706 MobiDBLite consensus disorder prediction 626 652 - -
Apr7g1696 706 Gene3D - 280 335 IPR023408 -
Apr7g1696 706 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 706 IPR045042 -
Apr7g1696 706 Gene3D - 173 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1696 Apr-Chr7 24217830 24224927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1696 9 706 Mechanosensitive Ion Channel Family AT5G10490 54.633 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1696 K22047 - gmx:100789444 1145.95