Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1691 ATGGTTTTACTACGACAGGGCATACAGCATGTTCGAAATTACTATAACTCAGAAGCTCAAATGATAAGAAGTAGCTTTTCTCGGCCATTCATCTCACAGACATACAAACAAGGTTTCTCAAAGCCAAGATCAAAGGCCGAGGTCAAATTACTGGCTGCTAAGAAACATAGTGAAGCAGAAAAGAGACGTAGAATGCGAATCAATGGTCAATATGAAACCCTCCGCAACGTCCTCCCTAACTTGATCAAAAAGGACAAGGCAACAGTGTTAGCAGAGACTATCAAGCAAGTGAAGGAGCTGAAGAAAAAAGTATCAAAACTGGAAGAAGATAGTCATGGTAACCCAAAGGAAGTTAAGTTTCCAAGTGGGGCAGACAGGTTGAATTTGGAAAAATGTTATGATTCACAGGGCCTAGTGAAGGCCACATTGAGTTGTGAGGATAGGCCAGGATTGATGTCAGCTATAACAAGGGCTCTGGGGTCAGTGAAAGCCAAAGTGGTAAAGGTTGAGATGGTGACTGTGGGTGGAAGAACAAGAAGTGTGTTGTGGGTTCAAGGTCATGGAAATGAAGGCCTAGGAATGCTCAAGAGTACTTTGAAGGTTGCCATGCACAAACCAGCTTTTAAGATGCGGCGGTTTACTCAATAA 648 0.429 MVLLRQGIQHVRNYYNSEAQMIRSSFSRPFISQTYKQGFSKPRSKAEVKLLAAKKHSEAEKRRRMRINGQYETLRNVLPNLIKKDKATVLAETIKQVKELKKKVSKLEEDSHGNPKEVKFPSGADRLNLEKCYDSQGLVKATLSCEDRPGLMSAITRALGSVKAKVVKVEMVTVGGRTRSVLWVQGHGNEGLGMLKSTLKVAMHKPAFKMRRFTQ* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1691 215 CDD ACT_UUR-ACR-like 142 186 - -
Apr7g1691 215 PANTHER TRANSCRIPTION FACTOR BHLH131 10 212 - -
Apr7g1691 215 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 55 113 IPR036638 GO:0046983
Apr7g1691 215 SUPERFAMILY ACT-like 141 204 IPR045865 -
Apr7g1691 215 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 51 100 IPR011598 GO:0046983
Apr7g1691 215 Pfam Helix-loop-helix DNA-binding domain 54 100 IPR011598 GO:0046983
Apr7g1691 215 Pfam ACT domain 142 209 - -
Apr7g1691 215 Gene3D - 139 211 - -
Apr7g1691 215 Coils Coil 90 110 - -
Apr7g1691 215 Gene3D - 52 119 IPR036638 GO:0046983
Apr7g1691 215 SMART finulus 57 106 IPR011598 GO:0046983
Apr7g1691 215 PANTHER TRANSCRIPTION FACTOR BHLH30 10 212 IPR045847 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1691 Apr-Chr7 24133521 24134664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1691 50 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G25710 39.855 7.47e-25 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr7g1691 ACT_6 1.8e-05 CL0070
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1691 - - gmx:102662951 303.138