Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1685 ATGGAATTCGAGGAAGATCAAGAGGAGCAAGAGGAAGAGCTGTGTGTGGGAGGAGCGAGTTACGACTCGCTGCCCAACACCCGGATGAAGATGCCGGGTGGGGCAGAAGCAATCATGCTGGCTCAGCCCGTGAGGAATAACACTGGTTCCGTCAAGGCAAGGTACAGGGAGTGCCTCAAGAATCACGCCGTCGGCATCGGAGGCCACGCCCTCGACGGTTGCGGCGAGTTCATCGCGGCGGGAACAGAAGGCACGCTCGACGCTCTCAAATGCGCAGCCTGCAACTGCCACCGCAATTTCCATCGCAAGGAGACCGACGCCCCCACGCTCGCCGGAGACCCATTCTTGCTCACGCACCATCCGCACCCCCACGCTCCGCCGCCGCCGCCGCAGTTCGCGGCGTATTACCGAATGCCGTCGGGTTACCTGCACGTGGGGGGACAGCAGAGGGGGGCGCTGGCGCTGCCGTCGACGTCCGGCGGCTGCGGCGGCGGAGGGACCCAGAGCACGAGGGAGGAGCAGGAGGATGTTTCGAACCCGAGTGCAGGAGGTGGAGGGTCGAAGAAGAGGTTCAGAACGAAGTTCACGCCGGAGCAAAAGGACAAGATGCTAGAGTTCGCGGAGAGGTTGGGGTGGAGGATTCAGAAGCACGACGAATCTGTTGTCCAAGAGTTCTGTAACGAAACTGGGGTTAAGCGTCAAGTTCTCAAGGTTTGGATGCATAACAACAAACACACTCTTGGTAAGAAGCCCTAG 756 0.6032 MEFEEDQEEQEEELCVGGASYDSLPNTRMKMPGGAEAIMLAQPVRNNTGSVKARYRECLKNHAVGIGGHALDGCGEFIAAGTEGTLDALKCAACNCHRNFHRKETDAPTLAGDPFLLTHHPHPHAPPPPPQFAAYYRMPSGYLHVGGQQRGALALPSTSGGCGGGGTQSTREEQEDVSNPSAGGGGSKKRFRTKFTPEQKDKMLEFAERLGWRIQKHDESVVQEFCNETGVKRQVLKVWMHNNKHTLGKKP* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1685 251 MobiDBLite consensus disorder prediction 161 181 - -
Apr7g1685 251 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 38 250 - -
Apr7g1685 251 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 54 104 IPR006456 -
Apr7g1685 251 Gene3D - 172 249 - -
Apr7g1685 251 MobiDBLite consensus disorder prediction 153 192 - -
Apr7g1685 251 Pfam ZF-HD protein dimerisation region 53 105 IPR006456 -
Apr7g1685 251 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 188 244 IPR006455 -
Apr7g1685 251 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 55 104 IPR006456 -
Apr7g1685 251 SUPERFAMILY Homeodomain-like 176 249 IPR009057 -
Apr7g1685 251 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 38 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1685 Apr-Chr7 24069231 24071265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1685 1 247 ZF-HD Transcription Factor Family AT4G24660 47.451 1.27e-68 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Apr7g1685 ZF-HD_dimer 6.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1685 - - gmx:100808910 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1685 7 24069231 24071265 Apr3g0738 3 19307671 19308555 PCT