Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1677 ATGTTCGGACCCTCCCAACCCGCTCCTAAATCCACCGTCAAATTCCTCTGCAGCTACGGCGGCAAAATCCTCCCTCGCTATCCCGACGGCAAGCTCCGTTATCTCGGCGGCCACACCCGCGTCCTCGCCGTTGAACGCTCCATTCCATTCACCGAGCTATTGCTGAAGCTCGAAGAGCTCTGCGGCTCCTCCGTGAGGCACCTTCGCTGCCAATTACCCGACGAAGACCTTGACGCTTTGGTTTCCATCACCTCCGACGAAGATCTCGCCAATCTCATCGAAGAATACGAGCGCGTCGTGTCGCCGTTGAAGATCAGAGCCTTCCTCTCGCCACCGAGATCTTCGACCAAGGTTTTCACACCTCCGTCATCCTCTCTGTCAAAATCAGCGTCCTCCTCTTCCTCCTCCTCTGCGTCGTCCACTTCTTCATCATCGTCGTATTGCAGCCCTACCGCCGGTGGTTCAGGTTCCGGGTCTGGCCGGAGGTATAGGGCTTTGGCGCCGGTGGTGGAGCGCTGCGTCCATCATATGTCGCCGCCGACGGCGTTTCCGGTCGGGGCTGAGAAATCCTCCGGGAGGAATATTCGTGTGCCTCGCTACGGTTACCACCATGCTCATGGGAGCGTGTATATGATCCACCACGGTTTAACCCAAGACTGA 660 0.5788 MFGPSQPAPKSTVKFLCSYGGKILPRYPDGKLRYLGGHTRVLAVERSIPFTELLLKLEELCGSSVRHLRCQLPDEDLDALVSITSDEDLANLIEEYERVVSPLKIRAFLSPPRSSTKVFTPPSSSLSKSASSSSSSSASSTSSSSSYCSPTAGGSGSGSGRRYRALAPVVERCVHHMSPPTAFPVGAEKSSGRNIRVPRYGYHHAHGSVYMIHHGLTQD* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1677 219 Gene3D - 31 111 - -
Apr7g1677 219 MobiDBLite consensus disorder prediction 112 161 - -
Apr7g1677 219 PANTHER OS05G0427100 PROTEIN-RELATED 6 214 - -
Apr7g1677 219 CDD PB1_UP2 16 109 - -
Apr7g1677 219 SUPERFAMILY CAD & PB1 domains 29 116 - -
Apr7g1677 219 MobiDBLite consensus disorder prediction 113 156 - -
Apr7g1677 219 SMART PB1_new 27 112 IPR000270 GO:0005515
Apr7g1677 219 Pfam PB1 domain 29 110 IPR000270 GO:0005515
Apr7g1677 219 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 6 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1677 Apr-Chr7 23936029 23939431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1677 13 109 MAP Kinase Kinase Kinase AT3G46920 50.000 3.59e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1677 - - gmx:100815157 282.722