Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1676 ATGCCTCTTCTTCTACTCGCTGGAACACCAACTTGGTCACTTGCTCCAATTCCTCGCCATCACCACCACCACAACAACAAACATCTAATCACAGCCTCGCAAAAGCACTTTCCTTTTCCTTCAAAGCGAACCCTTCTATTCCCTCCCTGCAGGCGCATTCTAGCAGCTCCTCCTCCGAAGTCCGCGTCCATCAATGGAGTATCCGTTCAGAAAAATCCAGAAGGTTCCAGAGAACTCAATGCTGCTGAGTTTATGGAGAGAATTCGCAAGTGGGTGGAGTTGCTTCCTTCTATTTTGCCCGGCGGCACGTGGTGGGACTTCTCCGACGACGTCGACGTTCAGGTCATGGCTCAGCCGGTGACCGTGTGGAGTGCTCTCAACAAAATGTGGGACCTTGTTTCTCGTGACAGATGGGTCATTTTCGCTGCTTTCTCTGCTCTGATTGTCGCTGCAGTTTCGGAGATTTCCATACCACACTTTTTGACCGCATCCATATTCTCGGCACAGGGTGCGGACCTTACTGTTTTCCATCGGAATGTGCGCCTGTTGGTTCTGTTGTGTGTGACTTCGGGAATATGCAGTGGGATACGAGGTTGCTGTTTTGGCATTGCGAACATGATTCTGGTTAAGAGAATGAGAGAAACATTATACTCTTCCCTTCTTCTTCAGGATATATCATTTTTTGACAATGAAACAGTAGGTGATTTGACCAGTAGGCTTGGTGCGGATTGTCAACAAGTGTCAAGGGTTATTGGAAATGATCTTAACTTGATATTGCGCAACGTACTTCAGGGTGGAGGTTCATTAATCTACTTGTTGATTTTATCTTGGCCACTTGGTTTGTGTACATTGATGATATGCTCCATATTAGCAGCAGTCATGTTACATTATGGAAGGTACCAGAAAAAGGCAGCTAGGTTAATCCAAGAAGTGACTGCTTCTGCAAATGATGTAGCTCAAGAGACATTCTCTCTTATTAGAACTGTTCGAGTTTATGGAACAGAAGAAGAAGAACTTGGAAGGTATAAATGGTGGCTGGGGAAATTAGCTGACATAAGCTTGCGACAAAGTGCCGCATATGGTGTTTGGAATTTTAACTTCAACATTCTTTACCATTCAACTCAGGTTATCGCTGTGCTATTTGGAGGAATGTCTATTCTTGCGGGTCATATTACAGCGGAGAAACTTACTAAGTTTATACTATACAGTGAATGGTTAATTTATTCAACCTGGTGGGTGGGAGATAATATATCCAATTTGATGCAATCAGTTGGAGCTAGTGAAAAAGTATTCCACCTAATGGATCTCTCACCTAGCAACCAATTCATAGAAAGAGGGGTAAAGTTGCAGAGATTAACAGGGTACATTGAGTTTCTAAATGTATCTTTTCACTATCCTTCAAGACCAACGGTATCTGTAGTGCAACATATAAACATTGTTGTCCATCCTAGCGAGGTGGTTGCAATTGTTGGTCTTAGTGGAAGTGGTAAAAGCACATTGGTGAATCTTTTGCTCCGACTCTATGAGCCTACAAATGGTCAGATTTTGATAGATGGTATCCCTCTTAAAGACTTGGACGTCATGTGGTGGAGAGAGAGAATTGGATATGTGGGACAGGAACCCAAACTCTTCCGGATGGATATTAGTTCAAACATCAGATATGGATGTACCCGAGATGTAAAGCAGGAGGATATTGAGTGGGCTGCGAAGCAGGCTTATGCCCATGACTTTATCTCAGCACTTCCCCATGGTTATAAAACAGTTGTTGATGATGATCTGTTAAGTGGGGGACAAAAGCAGCGGATTGCTATTGCTAGGGCCATTCTTAGGGACCCAAAAATATTGATCCTTGATGAAGCCACTAGTGCACTAGATGCTGAAAGTGAACATAATGTCAAGGGTGTTCTTCGAGCTGTTAGAAGTGATTCTGCAACGAGGAGAAGTGTCATAGTCATTGCACACAGGCTTTCTACCATACAGGCAGCTGACAGGATTGTGGTGATGGATGGTGGTCAAGTAGTTGAGATTGGAAGTCACAGGGAACTTCTCTTAAAAGATGGTTTATATGCACGGTTAACTAGAAAACAAGCTGATGCCGTGGCATGA 2106 0.4373 MPLLLLAGTPTWSLAPIPRHHHHHNNKHLITASQKHFPFPSKRTLLFPPCRRILAAPPPKSASINGVSVQKNPEGSRELNAAEFMERIRKWVELLPSILPGGTWWDFSDDVDVQVMAQPVTVWSALNKMWDLVSRDRWVIFAAFSALIVAAVSEISIPHFLTASIFSAQGADLTVFHRNVRLLVLLCVTSGICSGIRGCCFGIANMILVKRMRETLYSSLLLQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGGGSLIYLLILSWPLGLCTLMICSILAAVMLHYGRYQKKAARLIQEVTASANDVAQETFSLIRTVRVYGTEEEELGRYKWWLGKLADISLRQSAAYGVWNFNFNILYHSTQVIAVLFGGMSILAGHITAEKLTKFILYSEWLIYSTWWVGDNISNLMQSVGASEKVFHLMDLSPSNQFIERGVKLQRLTGYIEFLNVSFHYPSRPTVSVVQHINIVVHPSEVVAIVGLSGSGKSTLVNLLLRLYEPTNGQILIDGIPLKDLDVMWWRERIGYVGQEPKLFRMDISSNIRYGCTRDVKQEDIEWAAKQAYAHDFISALPHGYKTVVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVLRAVRSDSATRRSVIVIAHRLSTIQAADRIVVMDGGQVVEIGSHRELLLKDGLYARLTRKQADAVA* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1676 701 SUPERFAMILY ABC transporter transmembrane region 128 438 IPR036640 GO:0005524|GO:0016021
Apr7g1676 701 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 456 695 IPR003439 GO:0005524
Apr7g1676 701 Gene3D - 446 700 IPR027417 -
Apr7g1676 701 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 448 696 IPR027417 -
Apr7g1676 701 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 141 422 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr7g1676 701 PANTHER ABC TRANSPORTER B FAMILY 80 700 - -
Apr7g1676 701 CDD ABC_6TM_TAP 143 430 - -
Apr7g1676 701 PANTHER ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC 80 700 - -
Apr7g1676 701 SMART AAA_5 483 672 IPR003593 -
Apr7g1676 701 PIRSF ABC_prm/ATPase_B 62 701 - -
Apr7g1676 701 Gene3D ABC transporter type 1, transmembrane domain 123 441 IPR036640 GO:0005524|GO:0016021
Apr7g1676 701 Pfam ABC transporter 475 622 IPR003439 GO:0005524
Apr7g1676 701 ProSitePatterns ABC transporters family signature. 594 608 IPR017871 GO:0005524
Apr7g1676 701 Pfam ABC transporter transmembrane region 142 407 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1676 Apr-Chr7 23914362 23921221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1676 211 699 Calmodulin-binding Proteins AT2G36910 34.940 3.85e-72 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1676 - - gmx:100775951 1191.79