Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1675 ATGACGACGCGATTCAAGAAGAACAGGAAGAAGCGAGGGCACGTGAGCGCCGGCCACGGCCGCATTGGAAAACACCGGAAGCATCCCGGCGGTAGGGGAAACGCCGGAGTTGGAATGCGGTACTTCCACAAACTCCGCAACAAGTTCTATTGCCCCATCGTCAACATCGATAAGCTGTGGTCTCTGATACCCCAAGAGGTTCTCGGGAAGGGTGTTCTTCCCGAAAATCAGCCCCTCGTCGTGAAGGCCAAGCTCATTTCCAAGACCGCCGAGAAGAAGATTAAGGAGGCTGGTGGTGCTGTTGTTCTCACCGCTTAG 318 0.5535 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGVGMRYFHKLRNKFYCPIVNIDKLWSLIPQEVLGKGVLPENQPLVVKAKLISKTAEKKIKEAGGAVVLTA* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1675 105 MobiDBLite consensus disorder prediction 1 35 - -
Apr7g1675 105 Gene3D - 39 65 - -
Apr7g1675 105 PANTHER 60S RIBOSOMAL PROTEIN L27A 39 105 - -
Apr7g1675 105 PANTHER 60S RIBOSOMAL PROTEIN L27A 1 37 - -
Apr7g1675 105 MobiDBLite consensus disorder prediction 1 31 - -
Apr7g1675 105 Gene3D - 66 105 - -
Apr7g1675 105 Hamap 50S ribosomal protein L15 [rplO]. 1 104 IPR030878 GO:0003735|GO:0006412|GO:0015934
Apr7g1675 105 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 54 102 IPR021131 -
Apr7g1675 105 PANTHER BNAC06G24660D PROTEIN 1 37 - -
Apr7g1675 105 PANTHER BNAC06G24660D PROTEIN 39 105 - -
Apr7g1675 105 SUPERFAMILY Ribosomal proteins L15p and L18e 6 104 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1675 Apr-Chr7 23912880 23913583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1675 1 105 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 66.438 3.69e-59 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1675 K02900 - csv:101221117 188.734