Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1665 ATGGCTTCTCTTACTCAACTTCTTTCTCTTTTCCTCCCTCTTCTAGTAACTTCATGTGTACCTGCTGAATCTTCCCTTGAAGTTTCTATCAAATCAACCTACTTGGAACCTTTTAATTGCTCTACAAAGATCAGGACATGCAATGCCTCACTCTACCACATAAGCTATGATCTCAACATAAATCAAATAGCCAACTTTTACTCTGTTAATCCATCCCATATCAAACCCATAATGCGTGGGACCAAACAGGATTACCTTATAACTATACCTTGTTCTTGCAAAAACACTATTGACCTTAGCGGATATTTCTATGATACAACCTACAGAGTGTTGCCTGATGACACTTTTGTGGACATCAACAACCTTGTTTTCAGTGGCCAAGCTTGGCCTATTGATGGAGAATTGGTCCCAAATGAGAATTTAACAATACATCTTCCATGTGGGTGCTCAGAGAAAAGTGACTCTCAAATTGTTGTCACCTATACAGTGCAGCGGAATGATACTCCCACATCGATTGCTATTCTGCTAAATGCTACGGTTGATGGCATGGTGAGTAGGAACGAAGCTTTGGTTCAGAACCCCACATTCATTGATGTTACTTGGGTGCTATATGTTCCTATGGAATTGAATGGGTTACCACTTTCCAAAGGAAAAGGAATGAAACTCAAGTGGGTGATAATCATTGGCATCTTAGGGGGTGTGGCAGTATTTTCAATTATTACCTTAATCATTCTCATCGTCGTTGTCAGGATAACCAGAGCCCATGAAACCAGAAATAATGATCCGAATTCTCTCTCTAAAAGGACAATTTCCAATAGAACTGTTTCCTTAAAGAACCGAAACTTTCATACAGAATTTATGGAAGGAGAACAATTGTTGCTTATTCGTGGTAAATTTTGTGTAGATGCAACACAATTTGAGTCAGAAAGACCAGTAATTTATACTCTTGAGGAGATAGAAGATGCCACTAACAACTTCAATGAAAACCGAAGGATTGGAGTTGGTGGATATGGGAGTGTGTATTTTGGAATGTTAGGGGAGAAGGAGGTTGCTGTGAAGAAGATGAGGTCTAATAAATCCAAGGAATTCTATGCAGAACTCAAGGCCTTATGTAAGATCCATCATATTAACATTGTGGAGTTGTTAGGATATGCTAGCGGAGATGACCACCTTTATTTGGTGTATGAGTATGTTCCAAATGGATCTCTCAATGAGCATCTTCATGATCCATTACTGAAAGGTCACCAGCCTCTTTCTTGGTGTGCTAGGATTCAAATTGCACTGGATGCAGCAAAAGGCCTTGAATACATACATGATTACACAAAAGCACGATACGTGCACCGTGATATAAAGACTAGTAATATTCTTCTTGATGAGAAGCTCAGAGCAAAGGTAGCAGATTTTGGACTTGCAAAGCTTGGAGAACGAACCAATGATGAAGAATTTATAGCGACAAGGCTTGTTGGAACACCAGGCTACCTTCCACCAGAATCTGTGAAGGAGCTTCAAGTGACCGTGAAAACGGATGTATTTGCATTTGGTGTAGTTCTATCAGAGTTGATAACAGGCAAACGTGCGCTATTTCGTGAAGCCAACAACATGAAATCTCTTATTACCGTCATTGGCCAAATATTCCAAGCGGATGAGCCAGAGACTGCTTTAGCAGATTCCATTGATAGGAATCTTCAACATAGCTATCCTATGGAAGATGTCTACAAGATGGCAGAACTAGCTCATTGGTGCTTGTGCGACGATCCAACGGACAGGCCTGAAATGAGGGAGATGGTTGTGGCATTGTCACAGATTGTAATGTCCTCCGTAGAGTGGGAAGCATCACTGGGTGGAGACAGCGTCTTCAGCGGGGTATTTGATGGAAGATGA 1881 0.4094 MASLTQLLSLFLPLLVTSCVPAESSLEVSIKSTYLEPFNCSTKIRTCNASLYHISYDLNINQIANFYSVNPSHIKPIMRGTKQDYLITIPCSCKNTIDLSGYFYDTTYRVLPDDTFVDINNLVFSGQAWPIDGELVPNENLTIHLPCGCSEKSDSQIVVTYTVQRNDTPTSIAILLNATVDGMVSRNEALVQNPTFIDVTWVLYVPMELNGLPLSKGKGMKLKWVIIIGILGGVAVFSIITLIILIVVVRITRAHETRNNDPNSLSKRTISNRTVSLKNRNFHTEFMEGEQLLLIRGKFCVDATQFESERPVIYTLEEIEDATNNFNENRRIGVGGYGSVYFGMLGEKEVAVKKMRSNKSKEFYAELKALCKIHHINIVELLGYASGDDHLYLVYEYVPNGSLNEHLHDPLLKGHQPLSWCARIQIALDAAKGLEYIHDYTKARYVHRDIKTSNILLDEKLRAKVADFGLAKLGERTNDEEFIATRLVGTPGYLPPESVKELQVTVKTDVFAFGVVLSELITGKRALFREANNMKSLITVIGQIFQADEPETALADSIDRNLQHSYPMEDVYKMAELAHWCLCDDPTDRPEMREMVVALSQIVMSSVEWEASLGGDSVFSGVFDGR* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1665 626 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 24 626 IPR044812 GO:0019199|GO:0045087
Apr7g1665 626 SMART serkin_6 326 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1665 626 ProSiteProfiles Protein kinase domain profile. 326 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1665 626 Pfam Protein kinase domain 326 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1665 626 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Apr7g1665 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Apr7g1665 626 ProSiteProfiles LysM domain profile. 159 205 IPR018392 -
Apr7g1665 626 Gene3D Transferase(Phosphotransferase) domain 1 398 612 - -
Apr7g1665 626 Gene3D Phosphorylase Kinase; domain 1 304 397 - -
Apr7g1665 626 Gene3D LysM domain 151 210 IPR036779 -
Apr7g1665 626 SUPERFAMILY LysM domain 159 206 IPR036779 -
Apr7g1665 626 SUPERFAMILY Protein kinase-like (PK-like) 309 599 IPR011009 -
Apr7g1665 626 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 24 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1665 Apr-Chr7 23815847 23819892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1665 306 626 Receptor kinase-like Gene Family AT1G51940 52.711 3.99e-113 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Apr7g1665 Pkinase 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1665 - - gmx:100800907 963.755