Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1658 ATGTCTCTTCCGACGTTTTTGCTTATCTTCCTTTGTTACTGCACACTTCCTTCTCTTGCTGATCCAAGAGCCACAGAAGCTGCAGTGCTGTGCACCAACAGAACTACTCCAATGCCTCAGCAACATGTTTTCTTAACAAACTTTTACAATGCCTTGGAAGCCTTAACCGCTCTTGTTACAAGGCAAAGATATGCAGTTGTTGTAAAAGGGTCTTCTCAAAATGTCACTGTTTATGCTTTTGGTGAGTGCATGAAAGATCTTTCCAAACCTGATTGTGATGTATGCTTTGCACAGTGCAAGACACGTGTTCTTAAGTGTTCTCCATTTCAGAGAGGCATTTGTGGTGGCAAGCTCTTCTTTGATGGGTGCTATCTGCGGTATGATGGATACAACTTCTTCAATGAGAGTCTTAGTCCTCAAGACATGACTGTGTGTGGTGCCAAAGAGTTTAGTGGGAATTGGAGTGTTTATAAGGCCAATACTGAGGAGCTAGTGAGAAGTTTGAGCTTGGAAGCACCAAAGAATGATGGGTTCTTTGTGGGGTATGTGAGTCTAAGGAATGTTACTGTTTATGGGTTGGCTCAATGCTGGAAGTTTGTGAATGGCAGAGCCTGTCAAAACTGTTTGGCTAATGCTGTTACTAGGATTGATTCATGTGCTTCAAAAGAAGAAGGAAGGGTATTGCATGCTGGATGTTACTTGAGGTATTCGACACACGTGTTCTATAATCATTCAAACAACATTTCCCCTCAAGTGAATCAAGGAAGTAGAAATCTTGGTATAATTGTGGCTGCATCATATGCTGCAGTGGCTCATCTGCTGGTTGTTGCCATAGTTATTTTCTTTGTATGGACAAACGTCCTGAAGCGGAAGAGAGAGAGAAGACAGTTTGGTGCACTTTTGGACACAGTGAACAAGTCTAAACTAAATATGTCATATGACATTCTTGAAAAAGCCACAAATTACTTCAATGATTCTAATAAGCTAGGAGAAGGAGGATCAGGTTCAGTTTATAAAGGAGCTCTGCCTGATGGAAGAACCGTGGCTATAAAAAGGCTTAGCTTTAACACATCACAATGGGCCGATCATTTTTTCAATGAGGTCAATTTGATTAGTGGCATTCATCACAAAAATCTGGTGAAGCTTTTAGGTTGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTATGAATTTGTGCCTAACAATAGCCTTTATGATCACCTATCTGGCAGAAGGAATTCTCAACAGTTGACATGGGGAGTTAGGCATAAAATCATATTGGAAACAGCAGAGGGCTTGGCCTATCTTCATGAGGAATCACAAAGAATCATTCATAGAGATATAAAATTAAGCAACATTCTGCTTGATGATAACTTCACACCCAAGATTGCTGATTTTGGACTTGCTAGATTATTTCCAGAAGACAAGTCTCACCTTAGCACAGCCATTTGTGGCACACTGGGTTATATGGCTCCAGAATATGCAGTTCTTGGAAAGTTAACTGAGAAAGTAGATGTCTCCAGTTTTGGAGTTCTAGTCATGGAAATTATATCAGGCAAAAGGAGTAGATCCTTCGTTCAAAACTCATACTCCATCCTACATACGGTCTGGGGCCTTTATGTATCAAATAAGCTATGTGACATTGTCGATCCAATTCTAGAGGGAAATTATCCAATTGAGGAAGCATGCAAACTCCTTAAAATAGGGTTGCTTTGTGCACAAGCATCTTCAGAACTTCGACCAACAATGTCAGTAGTTGTGAAAATGATTACTAACAATCATGAAATTACTCAGCCAACACAACCACCGTTTCTCAATTGTGGTAGTGAAGAATTCAGCAAATCTACTTTACGATATACAAGTCTTCAGGGGACAGCATGA 1881 0.404 MSLPTFLLIFLCYCTLPSLADPRATEAAVLCTNRTTPMPQQHVFLTNFYNALEALTALVTRQRYAVVVKGSSQNVTVYAFGECMKDLSKPDCDVCFAQCKTRVLKCSPFQRGICGGKLFFDGCYLRYDGYNFFNESLSPQDMTVCGAKEFSGNWSVYKANTEELVRSLSLEAPKNDGFFVGYVSLRNVTVYGLAQCWKFVNGRACQNCLANAVTRIDSCASKEEGRVLHAGCYLRYSTHVFYNHSNNISPQVNQGSRNLGIIVAASYAAVAHLLVVAIVIFFVWTNVLKRKRERRQFGALLDTVNKSKLNMSYDILEKATNYFNDSNKLGEGGSGSVYKGALPDGRTVAIKRLSFNTSQWADHFFNEVNLISGIHHKNLVKLLGCSITGPESLLVYEFVPNNSLYDHLSGRRNSQQLTWGVRHKIILETAEGLAYLHEESQRIIHRDIKLSNILLDDNFTPKIADFGLARLFPEDKSHLSTAICGTLGYMAPEYAVLGKLTEKVDVSSFGVLVMEIISGKRSRSFVQNSYSILHTVWGLYVSNKLCDIVDPILEGNYPIEEACKLLKIGLLCAQASSELRPTMSVVVKMITNNHEITQPTQPPFLNCGSEEFSKSTLRYTSLQGTA* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1658 626 Pfam Protein kinase domain 324 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1658 626 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Apr7g1658 626 ProSiteProfiles Protein kinase domain profile. 323 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1658 626 ProSiteProfiles Gnk2-homologous domain profile. 138 241 IPR002902 -
Apr7g1658 626 Gene3D Phosphorylase Kinase; domain 1 284 398 - -
Apr7g1658 626 Pfam Salt stress response/antifungal 149 238 IPR002902 -
Apr7g1658 626 Pfam Salt stress response/antifungal 31 128 IPR002902 -
Apr7g1658 626 CDD STKc_IRAK 329 592 - -
Apr7g1658 626 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 15 605 - -
Apr7g1658 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Apr7g1658 626 SUPERFAMILY Protein kinase-like (PK-like) 309 607 IPR011009 -
Apr7g1658 626 SMART serkin_6 323 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1658 626 ProSiteProfiles Gnk2-homologous domain profile. 25 132 IPR002902 -
Apr7g1658 626 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 15 605 - -
Apr7g1658 626 Gene3D Transferase(Phosphotransferase) domain 1 399 602 - -
Apr7g1658 626 Gene3D - 25 132 IPR038408 -
Apr7g1658 626 Gene3D - 141 241 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1658 Apr-Chr7 23736529 23744497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1658 17 487 Receptor kinase-like Gene Family AT1G70530 58.985 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr7g1658 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1658 - - gmx:100802190 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1658 7 23736529 23744497 Apr7g1658 7 23736529 23744497 ECH
Apr7g1658 7 23736529 23744497 Apr4g1772 4 24010790 24013973 ECH
Apr7g1658 7 23736529 23744497 Apr6g0044 6 415697 418571 ECH
Apr7g1658 7 23736529 23744497 Apr7g1658 7 23736529 23744497 PCT