Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1657 ATGTTTTACTGCCAGAAGCTCCTCTTGGTCTTCAACTGGCCGTGCTTCTCAGGAATAGTGAAGTCTTCAAATGGCGTTTTGTGCTATAATGATGGCTTCCAAGCTCCAACAATAGTTGTTTGTGAATATCCTACTAGCAAAAGTTATTCATATCGGATCATCCCAAAAATGAAGAAAGTAGTCTCTCTCATCTCTTCTCAATGCCTTGTTTTCCCTCTCATCAAGTTGTTATTACTACTACTATCAGAAACTGTAATGGCAGAACCAAGGGCCAAGACAGTCCTTGTAACATGTGGCCATCAACTAGAGCATAACACAACTATCTTTGTTCCCAATTTTGTTGCAACTATGGAGAAGATCAGTGAAGAGATGCGCAAAACTGGTTTTGGCACAGCAATTGTAGGGACAGGACCTGACACAAACTATGGCCTGGCCCAGTGTTATGGAGATCTTTCATTACTTGACTGTGTGTTATGTTATGCTGAGGCACGCACGGTTCTTCCTCAGTGCTTCCCTTTCAATTCTGGTCGCATTTTCCTTGATGGTTGCTTCATGAGGGCTGAGAACTATAGTTTCTTTAATGAATATTCAGGACCAGGAGATACAGCTGTGTGTGGAAACACAACAAGAAAGAGCTCGAGTTTTCAAGCAGCAGCAAAGCAAGCAGTTTTAAGAGCAGCTCAAGATGCACCCAACAACAAAGGCTATGCCAAAGGGAACGTTGCAGTAACAGGAGCAACAAACCAATCCGCTTATGTTTTGGCTGATTGTTGGAGGACTTTGGACAAAAGCTCTTGCAAAGCATGTCTTGAAAATGCATCATCTTCCATATTGGGATGCTTGCCCTGGTCAGAAGGGCGAGCACTCAATACTGGATGCTTCATGAGGTACTCAGACACTGATTTTCTTAACAAGGAACAGCAAAATGGGAGTTCAAGAGGTAATGTAGTGGTGATAGTCGTTGCAGTAGTCAGTTCAGTGATTGTTTCAGTGGTTGGAGTTATTATTGGTGTCTATATATGGAAACAAAGATACATTCAAAAGAAACGAAGAGGTTCAAATGATGCAGAAAAGTTAGCTAAGACTCTTCAGCGCAATAGCTTGAACTTCAAGTACTCTACGTTGGACAAGGCTACTGGAAATTTTCATGAAAGTAACAAGTTAGGGCAAGGAGGATTTGGAACAGTTTATAAAGGAGTTCTAGCTGATGGAAGAGAGATTGCAATCAAGAGGTTATATTACAACAACAGACATCGAGCAGCAGATTTCTACAACGAAGTCAACATAATTAGTAGTGTGGAACACAAGAGTCTAGTCAGGTTGTTAGGATGCAGTTGTTCAGGACCTGAAAGCTTGCTTGTATATGAATTTCTACCCAACAAAAGTCTTGATCGCTTCATTTTTGATAAAAACAAGGGCAGAGAGCTGAACTGGGAAAAGAGATATGAAATTATGATTGGAACAGCTGAAGGATTAGTTTACCTGCATGAGAACTCCAAAATAAGGATAATTCACAGAGATATAAAAGCCAGCAACATCCTATTGGATGCAAAGCTTCGTGCTAAAATTGCTGATTTTGGCTTGGCCAGATCCTTTCAAGAAGACAAGAGCCACATAAGTACAGCTATAGCAGGAACTTTGGGGTATATGGCTCCTGAGTATCTAGCTCATGGTCAATTAACAGAGAAGGCAGACGTATATAGTTTTGGGGTTTTACTGCTAGAAATAGTTACTGGGAGACAGAACAACAGGAGCAAAGCATCGGAGTATTCAGACGGTTTAGTTACAGTGGCATGGAGGCATTTTCAGTCAGGGACTGCTGAACAATTATTTGATCCTAATCTAGAGTTGCATAACCACAATAGTAATATTAAGGATGAGATTTTAAGAGTGGTGCACATAGGACTTTTATGCACCCAAGAGGCCCCTTCATTACGGCCAACTATGTCAAAGGCACTCCAGATGCTTACAAAGAAGGATGAACAACTTGTTGCTCCCTCTAATCCACCCTTCTTAGATGAGAGTACTATGGAACTTCATGACACAAGTGGTGACCCATTTTATCCTCTTAATGCAGCTGATTCAATTGCTACCATGTCAAATAGCTCTTTTTATCCCAGGTGA 2124 0.4115 MFYCQKLLLVFNWPCFSGIVKSSNGVLCYNDGFQAPTIVVCEYPTSKSYSYRIIPKMKKVVSLISSQCLVFPLIKLLLLLLSETVMAEPRAKTVLVTCGHQLEHNTTIFVPNFVATMEKISEEMRKTGFGTAIVGTGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPFNSGRIFLDGCFMRAENYSFFNEYSGPGDTAVCGNTTRKSSSFQAAAKQAVLRAAQDAPNNKGYAKGNVAVTGATNQSAYVLADCWRTLDKSSCKACLENASSSILGCLPWSEGRALNTGCFMRYSDTDFLNKEQQNGSSRGNVVVIVVAVVSSVIVSVVGVIIGVYIWKQRYIQKKRRGSNDAEKLAKTLQRNSLNFKYSTLDKATGNFHESNKLGQGGFGTVYKGVLADGREIAIKRLYYNNRHRAADFYNEVNIISSVEHKSLVRLLGCSCSGPESLLVYEFLPNKSLDRFIFDKNKGRELNWEKRYEIMIGTAEGLVYLHENSKIRIIHRDIKASNILLDAKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLLLEIVTGRQNNRSKASEYSDGLVTVAWRHFQSGTAEQLFDPNLELHNHNSNIKDEILRVVHIGLLCTQEAPSLRPTMSKALQMLTKKDEQLVAPSNPPFLDESTMELHDTSGDPFYPLNAADSIATMSNSSFYPR* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1657 707 Pfam Salt stress response/antifungal 208 299 IPR002902 -
Apr7g1657 707 Pfam Salt stress response/antifungal 107 190 IPR002902 -
Apr7g1657 707 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 68 688 - -
Apr7g1657 707 ProSiteProfiles Protein kinase domain profile. 382 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1657 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Apr7g1657 707 ProSitePatterns Protein kinases ATP-binding region signature. 388 410 IPR017441 GO:0005524
Apr7g1657 707 Pfam Protein kinase domain 382 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1657 707 Gene3D Phosphorylase Kinase; domain 1 342 457 - -
Apr7g1657 707 Gene3D - 91 192 IPR038408 -
Apr7g1657 707 Gene3D - 202 302 IPR038408 -
Apr7g1657 707 ProSiteProfiles Gnk2-homologous domain profile. 197 302 IPR002902 -
Apr7g1657 707 SMART serkin_6 382 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1657 707 Gene3D Transferase(Phosphotransferase) domain 1 458 668 - -
Apr7g1657 707 CDD STKc_IRAK 388 658 - -
Apr7g1657 707 SUPERFAMILY Protein kinase-like (PK-like) 367 680 IPR011009 -
Apr7g1657 707 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 68 688 - -
Apr7g1657 707 ProSiteProfiles Gnk2-homologous domain profile. 91 192 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1657 Apr-Chr7 23728734 23733933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1657 69 707 Receptor kinase-like Gene Family AT1G70520 67.807 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr7g1657 Pkinase 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1657 - - gmx:100804094 1147.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1657 7 23728734 23733933 Apr7g1657 7 23728734 23733933 ECH
Apr7g1657 7 23728734 23733933 Apr7g1657 7 23728734 23733933 PCT