Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1644 ATGTTGGGGAGCAACAGTGGGAATCGCTTTCTTCCTGTTTTCCTGGATGAGACTCAATTTCGGCCACAAACTAATGGGTCAAATCAATTGCAGTTGTTTGGAAATTTACAAGCTGGATGCGGTGTTGATCCAGTTAATTACTTTGGAAATGAGCATATCAGCTCCATGATTCATCCTAACAAACGAAGCAGGGAAATGGAAGATATCTCAAAACAGAGGCTTCAAATTTCCTTAAATTATAATGTCTGTCAAGATGATGTTGATCGATTAGCAAGTATTCCGAACCCTAACCCTGTGTCAACAGGATTGAGGCTTTCATATGATGATGATGAGCGTAACTCATCTGTTACTTCTGCAAGTGGCAGCATGACTGTCACACCATCTATCATATTGTCTCTTGGTGACAACATCAAAACTGAGCTTGATAGGCAGCAAGAAGAGTTGGATCAGTATATTAAACTTCAGAAGGAACAATTGTCAAAGGGAGTAAGAGACATGAAGCAAAAGCACATGGCTTCTCTCCTTACTTCCATTGAGAAAGGTATTAGTAAGAAGCTAAAAGAAAAAGATGTGGAAATAGAGAACATGAACCGTAAAAATAGGGAGCTGGCGGAAAGAATAAAGCAAGTGGCTATTGAAGCACAAAGCTGGCACTACCGAGCAAAGTATAATGAGTCAGTTGTCAATGCATTAAAAAACAATCTGCAGCAGGCGATTTCACTAGGAGTTGAACAAGGGAAGGAAGGGTTTGGAGACAGTGAAGTTGATGATACTGCCTCATATATAGATCCTAATAACTTCCTGAGCATTCCGGGTGTGCCTATAAACTCTAATTACAAGAACTGCCAAGGTATGGAGAATCTGACTTGCAGAGCATGCAAGGCAAAGGAGGTTTCCATGTTGTTGATGCCTTGTAGACACTTGTGCTTGTGTAAGGACTGTGATGGATTGATCAATGTTTGTCCTGTATGCCAATTGATAAAAACTGGAAGTGTTGAAGTGTATCTGTCTTAG 1014 0.4043 MLGSNSGNRFLPVFLDETQFRPQTNGSNQLQLFGNLQAGCGVDPVNYFGNEHISSMIHPNKRSREMEDISKQRLQISLNYNVCQDDVDRLASIPNPNPVSTGLRLSYDDDERNSSVTSASGSMTVTPSIILSLGDNIKTELDRQQEELDQYIKLQKEQLSKGVRDMKQKHMASLLTSIEKGISKKLKEKDVEIENMNRKNRELAERIKQVAIEAQSWHYRAKYNESVVNALKNNLQQAISLGVEQGKEGFGDSEVDDTASYIDPNNFLSIPGVPINSNYKNCQGMENLTCRACKAKEVSMLLMPCRHLCLCKDCDGLINVCPVCQLIKTGSVEVYLS* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1644 337 Pfam Zinc finger, C3HC4 type (RING finger) 287 325 - -
Apr7g1644 337 PANTHER S-RIBONUCLEASE BINDING PROTEIN SBP1-RELATED 4 336 - -
Apr7g1644 337 PIRSF SBP1_RNase_bind 1 337 IPR017066 -
Apr7g1644 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 274 337 IPR013083 -
Apr7g1644 337 ProSiteProfiles Zinc finger RING-type profile. 290 325 IPR001841 -
Apr7g1644 337 Coils Coil 186 213 - -
Apr7g1644 337 Coils Coil 134 161 - -
Apr7g1644 337 MobiDBLite consensus disorder prediction 93 121 - -
Apr7g1644 337 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 4 336 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1644 Apr-Chr7 23580343 23585074 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1644 286 335 C3H Transcription Factor Family AT1G73950 38.000 8.31e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1644 K19042 - gmx:100791550 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1644 7 23580343 23585074 Apr7g1644 7 23580343 23585074 ECH