Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1638 ATGGCTAACGAAAATTTAGACAAGGCTTCAAATGGGTCATCTTCATCTGATTCAGATAATGCTTCGAATGGGTCATCTTCGTCTGATTCAGATAATAATGCTTCAAATGGAACATCTACCTCTGATTCAGATAAAGCTTCAAATGGGACATCTACATCTGATTCAGTTAAAGCTTCAAATGGAACATCTACATCTGATTCAGATAAACCTTCAAATGGGACATCTACATCTGATTCAGATAAAGCTTCAAATGGAACATCTACATCTGATTCAGATAATAATGCTTCAAAAGGGTCATCTTCACCAAAAGAAAATTCAGATAAGGCTTCAAATGCTTCATCATCAGATTCAGACAAGGGTCCGGCTCCCTCACCAAAATCATCTGTCTCAGAATCTCCGAAAAGTGCACCATCATTATCTCCGCCGCCGGCAACTCCGCCCCCTTCTCCACCACCTTCTCCGTCTCCCCCACCACCGCCGTCAAAAAAATCAGCCCCTCCACCCTCTCCACCGCCGCCATCGCCATCGCCATCACCGTCACCACCACCACGACCACCACCATCACCATCACCATCACCATCACCATCACCGCCATCACCATCGGCATCACCACCGTCACAACCGTCACCACTACCACCACCACCCTCTCAACAATTACCTCCGTCACAACCTCTTGTCCCTCCTCCTCCTCCTCCTCCTTCGCCTTGGGTTTCGCCTCCAACGCCACCTTCTCCTTCTTCCCATGGTTCAGGTTCAAACCACTCTCCACCTCCACCATCGCAATCACCACCAAATTCCCGTTCAAAACCAAGCACCACTTCTCCCCAAAGCGATTCTCCTTCGACGTCACCTAGCTCCCGTAACAACACAGCAGAATATGTTGGTTTTGCTCTCGCCGGATTTTTCCTTATTGCCTTTGTTGCAGCAGTTCTATTTTTTGTATTGAGAAAGAGGAAAAAGCGAGGGAGTATCTACGCCGTGCCACCCCATAAAAAACCTCATATGAAAGGAGGTGCTGATTTGCATTACTATGTACAGGAGCCTGGTTATGCCAATGGTCCACAAGATGGGTATTATGCTTCACAGCCTACCCATGCAGGTGCCATGCAGCATATAAGAAGTTCTTCAGACACGGCTCAGCCCATGAACACCGGTCAGATAGTTTTCACCTATGATAAGATTGCGGAAATTACAAGCAACTTTTCTAGTGAAAACGTAATAGGAGAGGGGGGATTTGGGTGTGTTTACAAGGCTTCAATGCCAGATGGAAGAGTTGGAGCAGTTAAGATATTGAAGGCTGGTAGTGGACAAGGAGAAAGAGAGTTCAGGGCTGAAGTTGAGATTATTAGCCGTGTACATCATCGACATTTGGTATCATTAATTGGTTATTGCATAGCAGAGCAGGAAAGAGTGCTTATCTATGAGTATGTTCCTAATGGGAATCTCGATCAGCACTTGCATGGAAATGATATGCCAATTTTGGAATGGCCCAAGAGGGTGAAGATAGCAATTGGTGCTGCAAGGGGCCTAGCATATCTCCATGAAGGCTGCAACCCAAGGATTATTCACAGAGATATTAAGTCGGCAAACATACTTCTAGATGATGCTTACGAGGCTCAGGTTGCAGACTTTGGACTTGCCAGGCTAACCGACGATGCTAATACCCACGTATCAACAAGGGTGATGGGGACCTTCGGGTACATGGCTCCAGAGTATGCAACAAGCGGAAAATTAACAGATAGATCAGATGTTTTCTCTTTTGGAGTTGTCCTTCTTGAGCTTATAACTGGAAGAAAACCTGTTGATCCAACACAGCCAATTGGAGAAGAGAGTTTGGTTGAGTGGGCTCGTCCACTCCTCCTTCGTGCAGTTGAGACAGGTGACTTTGGTGAACTAGTAGATCCAAGGCTTGAAAGGCAATACATTGACAGTGAAATGTTCAGAATGATTGAGGCAGCTGCAGCATGCGTTCGCCATTCTGCTCCAAAACGGCCTCGTATGGTTCAGGTGGTCAGAGCCTTAGATAGTGGAGATCAACAATATGATCTATCTAATGGGGTGAAATATGGTCAAAGCACTGTGTATGATTCTGGCCAGTATAATGAAGACATCATGAGATTCAGAAGGTTGGCTAATGGCAGCTTTGGTGATTCTGAGTATGACATGTACAGCGAATACAATTCAAAAGACATGGCTGGAGCCAAACATAGAAGGATGACATCTAGTGCAGGTGGTGATTCAGAATTTAAAGCTTTGAACAGCCAAAGTACCAGTGCCCAGAACATGTAA 2289 0.457 MANENLDKASNGSSSSDSDNASNGSSSSDSDNNASNGTSTSDSDKASNGTSTSDSVKASNGTSTSDSDKPSNGTSTSDSDKASNGTSTSDSDNNASKGSSSPKENSDKASNASSSDSDKGPAPSPKSSVSESPKSAPSLSPPPATPPPSPPPSPSPPPPPSKKSAPPPSPPPPSPSPSPSPPPRPPPSPSPSPSPSPPSPSASPPSQPSPLPPPPSQQLPPSQPLVPPPPPPPSPWVSPPTPPSPSSHGSGSNHSPPPPSQSPPNSRSKPSTTSPQSDSPSTSPSSRNNTAEYVGFALAGFFLIAFVAAVLFFVLRKRKKRGSIYAVPPHKKPHMKGGADLHYYVQEPGYANGPQDGYYASQPTHAGAMQHIRSSSDTAQPMNTGQIVFTYDKIAEITSNFSSENVIGEGGFGCVYKASMPDGRVGAVKILKAGSGQGEREFRAEVEIISRVHHRHLVSLIGYCIAEQERVLIYEYVPNGNLDQHLHGNDMPILEWPKRVKIAIGAARGLAYLHEGCNPRIIHRDIKSANILLDDAYEAQVADFGLARLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDPTQPIGEESLVEWARPLLLRAVETGDFGELVDPRLERQYIDSEMFRMIEAAAACVRHSAPKRPRMVQVVRALDSGDQQYDLSNGVKYGQSTVYDSGQYNEDIMRFRRLANGSFGDSEYDMYSEYNSKDMAGAKHRRMTSSAGGDSEFKALNSQSTSAQNM* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1638 762 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 114 758 - -
Apr7g1638 762 CDD STKc_IRAK 407 675 - -
Apr7g1638 762 Gene3D Transferase(Phosphotransferase) domain 1 477 694 - -
Apr7g1638 762 PANTHER RECEPTOR-LIKE KINASE 114 758 - -
Apr7g1638 762 MobiDBLite consensus disorder prediction 1 288 - -
Apr7g1638 762 Gene3D Phosphorylase Kinase; domain 1 364 476 - -
Apr7g1638 762 MobiDBLite consensus disorder prediction 1 135 - -
Apr7g1638 762 PRINTS Proline rich extensin signature 116 137 - -
Apr7g1638 762 PRINTS Proline rich extensin signature 141 157 - -
Apr7g1638 762 PRINTS Proline rich extensin signature 158 175 - -
Apr7g1638 762 PRINTS Proline rich extensin signature 177 202 - -
Apr7g1638 762 Pfam Protein tyrosine and serine/threonine kinase 404 673 IPR001245 GO:0004672|GO:0006468
Apr7g1638 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Apr7g1638 762 MobiDBLite consensus disorder prediction 732 762 - -
Apr7g1638 762 MobiDBLite consensus disorder prediction 266 288 - -
Apr7g1638 762 SMART serkin_6 401 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1638 762 MobiDBLite consensus disorder prediction 746 762 - -
Apr7g1638 762 ProSiteProfiles Protein kinase domain profile. 401 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1638 762 SUPERFAMILY Protein kinase-like (PK-like) 381 674 IPR011009 -
Apr7g1638 762 MobiDBLite consensus disorder prediction 136 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1638 Apr-Chr7 23539591 23544162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1638 252 730 Trihelix Transcription Factor Family AT1G70460 59.476 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Apr7g1638 PK_Tyr_Ser-Thr 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1638 - - lja:Lj2g3v1414850.1 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1638 7 23539591 23544162 Apr7g1638 7 23539591 23544162 ECH