Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1626 ATGATGGCTTCTTCTTTGAGGATCTCAAGGCTGTTATCTCGTTCTTTCTCTTCTGCTTCCACTACTTCTTTGTTTTCTAGAGGTGGGAGTGGTTCTTTGGGCACAGGGCATAAATACAGCACTGCTGCTGCTATTGGAGAACCAATTAAACCACCAGTTAAAGTAGAAAACACTCAGCTCTTAATTGATGGAAAATTCGTTGATGCGGCTTCTGGCAAAACTTTTCCAACGTTGGATCCGAGAACAGGAGATGTGATTTCTCGTGTTGCTGAGGGTGACCATGAAGATGTTGATCGAGCAGTTGCAGCTGCACGCAAAGCCTTTGATCATGGACCTTGGCCAAGGATGACAGCCTATGAAAGACAAAGGATATTGTTGCGTGCCGCTGATCTGTTTGAAAAGCATAATGACGAGCTTGCTGCACTAGAGACTTGGGATAATGGCAAGCCATATGAACAATCTGCTCAAATTGAAATTCCAATGCTGGTTCGTCTATTTCGATACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCCTGCTGATGGGCCACATCATGTGCAAACATTGCACGAACCAATCGGTGTTGCTGGTCAGATCATCCCGTGGAACTTCCCTCTTCTCATGTTTGCTTGGAAGGTTGGGCCAGCATTGGCCTGTGGTAACACTGTTGTTCTTAAAACAGCTGAGCAGACTCCATTATCTGCTTTGTATGTATCCAAGTTACTACATGAGGCTGGACTTCCTCCCGGTGTTCTGAATGTAATATCTGGCTTTGGTCCAACAGCTGGTGCTGCTATTGCTAGTCACATGGACATAGATAAGCTTGCTTTTACTGGTTCAACTGAAACTGGAAAAGTTGTCCTTGAACTTGCGGCAAGAAGCAATCTTAAGCCAGTAACTTTGGAGCTTGGTGGGAAATCCCCTTTTATTGTAAGCGAAGATGCTGATGTAGATGAGGCTGTTGAGCTAGCACACTTTGCATTGTTCTTTAATCAGGGACAATGCTGCTGTGCTGGGTCTAGAACATTTGTACATGAACGTGTGTACGACGAGTTTGTTGAGAAGGCGAAGGCACGTGCTTTGAAGCGTTCTGTTGGCGATCCATTCAAGCAGGGAATAGAGCAAGGTCCTCAGATTGATTCAGAACAATTGGAGAAAATACTGAAGTATATTAGAACCGGTGTTGAAAGTGGAGCTACACTTGAAGCTGGTGGAGAGAGACTTGGCAACAAGGGCTTCTATGTTCAGCCTACTGTCTTCTCAAATGTTCAGGATGGCATGCTGATTGCAAAGGATGAGATCTTTGGCCCAGTGCAATCCATATTAAAATTCAGGGACCTTGATGAGGTAATTAGAAGAGCAAATAACACACCCTATGGCCTTGCAGCAGGGGTGTTCACAAAAAACATTGACACTGCTAACACTTTAGCTCGAGCATTGCGAGTTGGAACAGTATGGGTGAACAGCTTTGATACATTTGATGCAGCAATTCCCTTTGGAGGATTCAAGATGAGTGGACACGGAAAAGAAAAAGGAGAATATAGTCTTAGGAACTACTTGCAAGTGAAGGCTGTTGTTACATCCTTGAAGAACCCTGCTTGGCTTTGA 1617 0.4447 MMASSLRISRLLSRSFSSASTTSLFSRGGSGSLGTGHKYSTAAAIGEPIKPPVKVENTQLLIDGKFVDAASGKTFPTLDPRTGDVISRVAEGDHEDVDRAVAAARKAFDHGPWPRMTAYERQRILLRAADLFEKHNDELAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTAEQTPLSALYVSKLLHEAGLPPGVLNVISGFGPTAGAAIASHMDIDKLAFTGSTETGKVVLELAARSNLKPVTLELGGKSPFIVSEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRSVGDPFKQGIEQGPQIDSEQLEKILKYIRTGVESGATLEAGGERLGNKGFYVQPTVFSNVQDGMLIAKDEIFGPVQSILKFRDLDEVIRRANNTPYGLAAGVFTKNIDTANTLARALRVGTVWVNSFDTFDAAIPFGGFKMSGHGKEKGEYSLRNYLQVKAVVTSLKNPAWL* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1626 538 SUPERFAMILY ALDH-like 55 532 IPR016161 GO:0016491
Apr7g1626 538 CDD ALDH_F2BC 55 530 - -
Apr7g1626 538 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 304 311 IPR029510 GO:0016491
Apr7g1626 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 310 499 IPR016163 GO:0016620
Apr7g1626 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 72 528 IPR016162 GO:0016491
Apr7g1626 538 Pfam Aldehyde dehydrogenase family 66 528 IPR015590 GO:0016491
Apr7g1626 538 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 37 538 - -
Apr7g1626 538 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 332 343 IPR016160 GO:0016491
Apr7g1626 538 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 37 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1626 Apr-Chr7 23436899 23441451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1626 7 538 Aldehyde Dehydrogenase Gene Family AT3G48000 75.514 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1626 K00128 - gmx:100786773 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1626 7 23436899 23441451 Apr7g1626 7 23436899 23441451 ECH