Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1622 ATGGCATCAAGATCATATGCTAATCTACTGGAGCTAGCTGGAGGTTTACTGGATATTCCTCACACCCCAAGAACTATTCCAAGGATTATGACAGTTCCTGGAGTTATTTCTGACCTGGATGTTTATGGTAGATGTGATGGGGATTCAGATGTTAGCTCTTCTGGTTGTCGGGAGAGGAAAATCATTGTAGCAAACATGTTGCCATTGCAGGCTAAAAGAGACATCGACACTGCTAAATGGTGTTTCAGTTTGGATGAGGATTCAATTTTGTTACAATTAAAAGATGGTTTTTCTTCTGACACTGAGGTGATTTATGTGGGATCCCTCAAGGTTGATATAGATGCCAGTGAGCAGGAAGAAGTTGCTCAGAAATTACTGGAGGACTTTAATTGCATACCTACCTTTCTACCCCATGATCTCCAGAAAAAATTTTATCTTGGTTTTTGCAAACAGCAGCTCTGGCCTCTCTTTCATTACATGCTACCTATGTGCCCTGATCATGGTGATCGTTTTGACCGCTTGCTTTGGCAGGCCTATGTTTCTGCAAACAAAATATTTGCAGACAAGGTTATGGAAATAATCAATCCTGATGATGATTTTGTTTGGGTTCATGACTATCATTTGATGGTTTTGCCTACATTCTTGAGGAAGCGGTATAATCGAGTTAAACTAGGATTCTTTCTTCACAGTCCTTTCCCTTCATCTGAAATTTACCGAACTTTGCCAGTAAGGGATGGAATTTTGAGGGGGTTGTTGAATTCTGATTTAATTGGACTTGATTACTTTGGCCGTACTATATTTATCAAAATTTTGCCTGTGGGCATTCATATGGGTCGGCTTGAATCTGTATTAAATCTCCAATCTACATCTGCTAAATTGAAAGAGATTCAGGAAGAGTTTAAGGGTAGGAAGGTGATTCTTGGTGTTGATGACATGGATATCTTTAAGGGCATTAGTCTGAAGCTTCTAGCTGTTGAGCAGCTGCTGCAGCAGAATCCAGATTTGCAGGGCAAAGTTGTCCTTGTTCAGATTGTGAATCCTGCAAGGGGCTCAGGCAAGGATGTTCATGAAGCAAAGAAGGAAACATATTTAATCGCTGGGAGGATTAATGATACTTATGGTTCTAACCATTATCGGCCAGTTATTCTCATTGACCGTCCTGTTCCTCGTTTTGAGAAGAGTGCCTATTATGCTGTGGCAGAATGTTGCATTGTCAATGCTGTGAGGGATGGTATGAACTTAGTCCCATACAAATATATTGTTTGTAGAGAAGGAACTGCACAGCTGGACAAAGCTTTGATTAGAAAAAGTGATTCTCCTCGTACCAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGTTCTCCTTCTCTAAGTGGAGCAATCAGGGTCAATCCCTGGAACATAGATGCAGTGGCTGATGCTCTGTATTCAGCTATTACTATGCAGGATTCAGAGAAGCAATTGAGACATGAGAAACACTACCGATACATCAGTTCTCATGATGTTGCATATTGGGCACGCAGCTTTATTCAGGATTTAGAGAGAGCGTGTAAAGATCATTACATCAAAAGGTGTTGGGGAATGGGTTTGGGGCTAGGGTTCAGAGTTGTTTCTCTTTCTCCTTGTTTTAGAAAATTGTCCGTTGACCACATTGTCTCAGCATACAAAAGAACCAGTAGAAGAGCCATATTTCTGGATTATGACGGTACTATTGTACCAAAATCTTCTATAAATAAAACCCCCAGCTCTGAAGTCATATCTGTGCTTAATGATCTGAGTAATGATACTAAAAATACTGTGTTCATTGTTAGTGGAAGGGGAAGAAATTCTTTAAGTGATTGGTTTACGTCATGCAAAATGATTGGCCTTGCAGCTGAACATGGATACTTTTTAAGGTGGAATAAAGATTCTGAATGGGAAACCAGTCACTTGTCTGCTGATCTTGATTGGAAGAAGATTGTGGAACCTGTCATGCAGTTGTATACAGAGGCCACTGATGGATCTAATATTGAAACTAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGTTCTTGCCAAGCCAAAGAATTGTTGAATCATCTGGAAAGTGTGCTTGCTAATGAACCTGCTGTTGTTTCAAGGGGACAGCATATTGTTGAAGTCAAGCCGCAGGGAATAAGCAAGGGCGTGGTAGCTGAAAAGATTCTTTCCACTATGGTTAATGGTGGCAATCCACCAGATTTTTTTATGTGCGTTGGAGATGATATTTCTGATGAAGACATGTTTGAGAGCATATTACGGACAGTTTCATGCCCATCATTGCCAGTACTTCCAGACGTCTTTGCCTGCACTGTTGGTCAGAAACCTAGTAAAGCCAAATATTACCTTGATGATCCTGCCGATGTGATGAAGTTGCTGAAAGGCCTTAGTGCTTCATCTAATCCAAAGCGCAGGCATCTAGCCCAATTCCAAATTTCTTTTGAGAGCACTGTTTGA 2493 0.4083 MASRSYANLLELAGGLLDIPHTPRTIPRIMTVPGVISDLDVYGRCDGDSDVSSSGCRERKIIVANMLPLQAKRDIDTAKWCFSLDEDSILLQLKDGFSSDTEVIYVGSLKVDIDASEQEEVAQKLLEDFNCIPTFLPHDLQKKFYLGFCKQQLWPLFHYMLPMCPDHGDRFDRLLWQAYVSANKIFADKVMEIINPDDDFVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDGILRGLLNSDLIGLDYFGRTIFIKILPVGIHMGRLESVLNLQSTSAKLKEIQEEFKGRKVILGVDDMDIFKGISLKLLAVEQLLQQNPDLQGKVVLVQIVNPARGSGKDVHEAKKETYLIAGRINDTYGSNHYRPVILIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCREGTAQLDKALIRKSDSPRTSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADALYSAITMQDSEKQLRHEKHYRYISSHDVAYWARSFIQDLERACKDHYIKRCWGMGLGLGFRVVSLSPCFRKLSVDHIVSAYKRTSRRAIFLDYDGTIVPKSSINKTPSSEVISVLNDLSNDTKNTVFIVSGRGRNSLSDWFTSCKMIGLAAEHGYFLRWNKDSEWETSHLSADLDWKKIVEPVMQLYTEATDGSNIETKESALVWHHQDADPDFGSCQAKELLNHLESVLANEPAVVSRGQHIVEVKPQGISKGVVAEKILSTMVNGGNPPDFFMCVGDDISDEDMFESILRTVSCPSLPVLPDVFACTVGQKPSKAKYYLDDPADVMKLLKGLSASSNPKRRHLAQFQISFESTV* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1622 830 Gene3D Glycogen Phosphorylase B; 49 265 - -
Apr7g1622 830 Gene3D Glycogen Phosphorylase B; 278 498 - -
Apr7g1622 830 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 518 - -
Apr7g1622 830 Pfam Glycosyltransferase family 20 259 514 IPR001830 GO:0003824|GO:0005992
Apr7g1622 830 CDD GT20_TPS 59 514 IPR001830 GO:0003824|GO:0005992
Apr7g1622 830 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 257 821 - -
Apr7g1622 830 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 1 259 - -
Apr7g1622 830 TIGRFAM T6PP: trehalose-phosphatase 559 808 IPR003337 GO:0003824|GO:0005992
Apr7g1622 830 Pfam Trehalose-phosphatase 564 798 IPR003337 GO:0003824|GO:0005992
Apr7g1622 830 Gene3D - 690 822 IPR023214 -
Apr7g1622 830 Gene3D - 560 678 IPR023214 -
Apr7g1622 830 SUPERFAMILY HAD-like 561 807 IPR036412 -
Apr7g1622 830 CDD HAD_TPP 562 803 - -
Apr7g1622 830 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 257 821 IPR001830 GO:0003824|GO:0005992
Apr7g1622 830 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 259 IPR001830 GO:0003824|GO:0005992
Apr7g1622 830 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 562 763 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1622 Apr-Chr7 23373338 23378852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1622 1 830 Trehalose Biosynthesis Gene Families AT1G60140 69.570 0.0 1266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1622 K16055 - gmx:100818536 1543.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1622 7 23373338 23378852 Apr7g1622 7 23373338 23378852 ECH