Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1608 ATGCTTCATTTGTTAGAACCTGACATTATTGAACAGAGAACATATAAGATAGAGAATTCAATCATGCCATTTGGTTTGGTCTCAGCTTGGAACAAGCGCCGTAGAAGCAAATCTCAAGATCATACAGATCCCTGGGTTTACAAACCTGCACAGCTTTGGCAACTTGAAGATCAAACCCCACGTCCTACCAAAAGGCTGCATGGATCAACTGTTTTCACACTCAAGGAGATGGAAGAAGCAACATGTTCATTCAGCGATGAAAAGTTACTTGGAAAAGGAGGGTTTGGCAAAGTTTACCGGGGCACTTTGCGGTCCGGCGAGGTAGTAGCAATCAAGAAAATGGAGCTGCCAGCAATTAAAGCAGCAGAGGGGGAACGTGAATTCCGTGTCGAGGTTGACATTTTGAGCAGACTTGATCACCCAAATCTCGTGTCTTTGATAGGCTACTGTGCTGATGGAAAGCATAGATTCCTAGTATATGAATATATGCGTAATGGGAACCTGCAAGACCATTTGAATGGAATTGGGGAAAGAAACATGGATTGGCCTCGAAGACTGCAAGTGGCTCTGGGAGCTGCAAAAGGGCTTGCTTATCTACATTCCAGTTCTGATGTTGGAATTCCTATTGTTCATAGAGATTTAAAATCGACCAATATTCTCTTAGATGCCAACTTTGAGTCAAAGATATCTGATTTTGGGCTGGCCAAGTTAATGCCGGAAGGGCAGGAGACACACGTGACTGCCAGAGTACTTGGTACTTTTGGCTATTTTGATCCCGAGTATACATCGACTGGAAAACTCACTCTACAAAGTGATGTTTATGCTTTTGGTGTTGTTCTTCTGGAGCTTTTGACTGGACGCCGAGCTGTAGATCTAAATCAGGGTCCCAACGATCAAAACCTTGTACTACAGGTGAGGCACATATTGAATGACCGCAAGAAGCTTCGTAAGGTGATAGATCCAGATATGGCTCGAAATTCTTACACCCTTCAGTCTGTAGTCATGTTTGCCAATCTAGCATCAAGATGTGTCCGAACAGATAGTAATGAGAGACCATCAATGGCAGAATGTATAAAAGAACTCCTAATGATTATCTATACAAATTCAAAAGGCTTGGGAATGGTTATGCATAGTTTGAGAATGATCTAG 1149 0.4265 MLHLLEPDIIEQRTYKIENSIMPFGLVSAWNKRRRSKSQDHTDPWVYKPAQLWQLEDQTPRPTKRLHGSTVFTLKEMEEATCSFSDEKLLGKGGFGKVYRGTLRSGEVVAIKKMELPAIKAAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMRNGNLQDHLNGIGERNMDWPRRLQVALGAAKGLAYLHSSSDVGIPIVHRDLKSTNILLDANFESKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHILNDRKKLRKVIDPDMARNSYTLQSVVMFANLASRCVRTDSNERPSMAECIKELLMIIYTNSKGLGMVMHSLRMI* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1608 382 Pfam Protein kinase domain 85 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1608 382 CDD STKc_IRAK 90 361 - -
Apr7g1608 382 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 22 382 - -
Apr7g1608 382 Gene3D Phosphorylase Kinase; domain 1 52 162 - -
Apr7g1608 382 Gene3D Transferase(Phosphotransferase) domain 1 163 372 - -
Apr7g1608 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Apr7g1608 382 SUPERFAMILY Protein kinase-like (PK-like) 60 367 IPR011009 -
Apr7g1608 382 ProSiteProfiles Protein kinase domain profile. 84 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1608 382 SMART serkin_6 84 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1608 382 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524
Apr7g1608 382 PANTHER OS01G0750732 PROTEIN 22 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1608 Apr-Chr7 23228765 23242758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1608 67 365 Receptor kinase-like Gene Family AT3G58690 46.382 3.01e-89 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Apr7g1608 Pkinase 2.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1608 - - aprc:113868910 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1608 7 23228765 23242758 Apr7g1608 7 23228765 23242758 ECH