Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1597 ATGTCGGTATCCTTCTCCAACTGCTTCCCCGACTCCTTCCTTCTCTGCGGCGAGGACACCTCCGGAATATTGTCCTCCGGCGATTCGCCGGAATGTTCCTCTGACCTCGATTCCTCGCCGCCGTCGGAGGAGGAGTCTATAGCCGGATTCATCGAAGACGAGCGAAACTTCGTTCCCGGATTTGATTACCTCACAAGGTTCCAGTCTCGCTCGCTCGACGCCACCGCCAGAGAAGAATCCGTTGCATGGATTCTCAAGGTGCAGGCTTATTACGCTTTTCAACCGCTCACGGCTTATCTTTCCGTCAATTACATGGATCGGTTCTTGAACTCTCGGCCGTTGCCGCAAACAAATAATGGGTGGCCACTGCAACTTCTATCAGTCGCGTGCTTGTCTTTAGCGGCAAAGATGGAGGAACCTCTAGTTCCGTCTCTATTGGACCTTCAGGTAGAAGGTGCCAAATACATATTTGAGCCCAGAACAATTAGAAGGATGGAGCTACTTGTCCTGGGCGTCTTGGATTGGAGACTAAGATCAGTCACGCCATTTAGCTTCCTCGGTTTCTTTGCGTGCAAGTTAGATTCAACAGGAACTTTTACTGGGTTCCTCATTTCACGGGCTACACAAATTATCTTATCTAATATCCAAGAGGCCAGTTTTGTTGCGTATTGGCCATCATGCATTGCTGCCGCGGCCATTCTCCATGCAGCTAACGAAATTCCTAATTGGTCTCTCGTTAAGCCTGAGCATGCCGAGGCGTGGTGCGACGGGCTAAGAAAAGACAAAATTACGGGGTGCTACCAATTAATGCAAGAACTTGTGATTGACCACAACCAGAGGAAACTCCCTAAAGTGTTACCACAGCTGCGAGTGACAACTCGTCCCCTTATGAGGTCACGTGTCTCGTCATTCTCAACTTCCTCTTCTTCTTCGTCTTCTTCTTCTCCCCCTGTTTCTTGTAAAAGGAGGAAATTAAATAACTGTTTGTGGGTAGATGATGACAATGGAAACTCCCTGTGA 1020 0.4882 MSVSFSNCFPDSFLLCGEDTSGILSSGDSPECSSDLDSSPPSEEESIAGFIEDERNFVPGFDYLTRFQSRSLDATAREESVAWILKVQAYYAFQPLTAYLSVNYMDRFLNSRPLPQTNNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMELLVLGVLDWRLRSVTPFSFLGFFACKLDSTGTFTGFLISRATQIILSNIQEASFVAYWPSCIAAAAILHAANEIPNWSLVKPEHAEAWCDGLRKDKITGCYQLMQELVIDHNQRKLPKVLPQLRVTTRPLMRSRVSSFSTSSSSSSSSSPPVSCKRRKLNNCLWVDDDNGNSL* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1597 339 MobiDBLite consensus disorder prediction 26 41 - -
Apr7g1597 339 ProSitePatterns Cyclins signature. 77 108 IPR006671 -
Apr7g1597 339 Gene3D - 60 178 - -
Apr7g1597 339 Pfam Cyclin, N-terminal domain 49 177 IPR006671 -
Apr7g1597 339 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 324 - -
Apr7g1597 339 SUPERFAMILY Cyclin-like 38 177 IPR036915 -
Apr7g1597 339 SMART cyclin_7 82 171 IPR013763 -
Apr7g1597 339 SMART Cyclin_C_2 180 307 IPR004367 -
Apr7g1597 339 PANTHER CYCLINS 1 324 IPR039361 -
Apr7g1597 339 Gene3D - 51 267 - -
Apr7g1597 339 Pfam Cyclin, C-terminal domain 180 290 IPR004367 -
Apr7g1597 339 SUPERFAMILY Cyclin-like 162 285 IPR036915 -
Apr7g1597 339 MobiDBLite consensus disorder prediction 26 45 - -
Apr7g1597 339 CDD CYCLIN 83 170 IPR013763 -
Apr7g1597 339 MobiDBLite consensus disorder prediction 300 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1597 Apr-Chr7 23145259 23148729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1597 1 338 Core Cell Cycle Gene Families AT1G70210 63.050 1.04e-137 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1597 K18810 - gmx:100780369 542.732