Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1590 ATGCCGGGGCATCGGTCGAACTCGGAGAAGCACGACAGCGAGAAGCAGCTCCGGCGAGACCCCTATGAGGTTCTCGGCGTCTCTCGCAACTCCACGGATCAAGAAATAAAAACCGCGTACCGTAAAATGGCTCTCAAATACCATCCAGACAAGAATGCTAATGATCCTAAAGCAGCTGATATGTTTAAAGAAGTTACCTTTTCTTATAATATCTTGTCAGATCCCGACAAACGGCGTCAGTACGACTCAGCTGGCTTTGAGGCTGTTGAAACAGATAACCAAGAGTTGGAATTAGATCTTTCAAGTTTGGGTGCTGTCAATACAATGTTTGCTGCACTTTTTAGCAAACTTGGTGTGCCAATCAAGACAACTGTATCTGCAACTGTTTTGGAAGAGGCACTCAATGGTTTAGTGACCATTCGTCCACTTCTATTGGGACAGTTTATATCTAAAAGGGTTGAGAAGCAATGTGCGCACTTCTATTCAGTTACAATTACAGAAGAGGAAGCGCGAGCTGGATTTGTTTGTCGAGTTCAATCGTCAGACAAAAGCAAGTTCAAGTTATTATATTTCGATCAGGAAGACAATGGTGGTTTAAGTCTTGCACTCCAGGAAGACAGTGCAAAAACAGGGAAGGTTACTTCTGCTGGAATGTATTTTCTTGGGTTTCCTGTTTATCGGTTGGATCAAACAATGACCTCTATAGCTGCTGCTAAGGATCCAGATACATCATTTTTCAGAAAGCTGGATGGGTTCCAGCCATGTGAATTAACAGAATTGAAGGCTGGCACACATGTATTTGCTGTCTATGGTGACAACTTTTTCAAAAGTGCAAACTATACAATAGAAGCTCTGTGTGCTGCACCTTTTAGTGAAGAAAAAGAAAATTTAAGAAGTATAGAAGCTCAAATTTTGTCTAAAAGGGCAGAAATATCAAAGTTTGAAGCAGAATATCGAGAGGTTCTGGCACAATTCACAGAGATGACAAGCAGATATGCACATGAAATGCAAGCAATTGATGAGCTACTGAAGCAAAGAAATGAAATACATGCATCATACACTACTACTCCTTTAAAACGGAGTGCTAGTAAGAGCAGAAGTAAAAGTTCTTCCAAGGAGGCAAAAGAAGATGGCCAAGCAAGGGAAAAAAGGAGTTCAAGAGATCGGCCAAATAAGAAGAAATGGTATAACCTCCACTTAAGAGTTGATAAGAGAAAGGCTTGCTAA 1227 0.4116 MPGHRSNSEKHDSEKQLRRDPYEVLGVSRNSTDQEIKTAYRKMALKYHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYDSAGFEAVETDNQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGLVTIRPLLLGQFISKRVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDQEDNGGLSLALQEDSAKTGKVTSAGMYFLGFPVYRLDQTMTSIAAAKDPDTSFFRKLDGFQPCELTELKAGTHVFAVYGDNFFKSANYTIEALCAAPFSEEKENLRSIEAQILSKRAEISKFEAEYREVLAQFTEMTSRYAHEMQAIDELLKQRNEIHASYTTTPLKRSASKSRSKSSSKEAKEDGQAREKRSSRDRPNKKKWYNLHLRVDKRKAC* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1590 408 ProSiteProfiles dnaJ domain profile. 20 85 IPR001623 -
Apr7g1590 408 MobiDBLite consensus disorder prediction 1 30 - -
Apr7g1590 408 MobiDBLite consensus disorder prediction 353 396 - -
Apr7g1590 408 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 1 407 - -
Apr7g1590 408 PRINTS DnaJ domain signature 22 40 IPR001623 -
Apr7g1590 408 PRINTS DnaJ domain signature 40 55 IPR001623 -
Apr7g1590 408 PRINTS DnaJ domain signature 57 77 IPR001623 -
Apr7g1590 408 PRINTS DnaJ domain signature 77 96 IPR001623 -
Apr7g1590 408 SUPERFAMILY Chaperone J-domain 19 89 IPR036869 -
Apr7g1590 408 Gene3D DnaJ domain 4 103 IPR036869 -
Apr7g1590 408 CDD DnaJ 20 74 IPR001623 -
Apr7g1590 408 PANTHER DNAJ DOMAIN-CONTAINING PROTEIN-RELATED 1 407 - -
Apr7g1590 408 Pfam DnaJ domain 20 82 IPR001623 -
Apr7g1590 408 ProSitePatterns Nt-dnaJ domain signature. 62 81 IPR018253 -
Apr7g1590 408 SMART dnaj_3 19 77 IPR001623 -
Apr7g1590 408 Coils Coil 297 317 - -
Apr7g1590 408 MobiDBLite consensus disorder prediction 1 22 - -
Apr7g1590 408 MobiDBLite consensus disorder prediction 366 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1590 Apr-Chr7 23064959 23069509 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1590 13 83 C2H2 Transcription Factor Family AT1G74250 40.789 4.61e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1590 - - gmx:100800929 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1590 7 23064959 23069509 Apr7g1590 7 23064959 23069509 ECH