Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1589 ATGGAAAGGGATGTTTGTGATCTTTCCTCAACATGGGATGGTGATAATGGCAATTCTGTGGAGAAAAGGCTCAGGTTATTTGGCTTTGAGCTAAATCCATCCAAGAATACCGAGGGTTGTGTCAAAGAGTCTGGTGAAGGAGATGAAAGTGTGAACTCCTCTAACTCGGTTTCATCAGGAGGAGAAAAAACTGTCCAAGAGAAAAGCTCAGCCAAAGACTCGGATGAGAGAAAGTTTGAGTGCCAATACTGTTTCAAGGAATTTGCAAACTCACAAGCATTAGGAGGTCATCAAAATGCCCACAAGAAAGAGAGAATGAAGAAGAAAAGATTGCAGCTTCAAGCTAGAAAGGCTAGCATAAACTACTACCTACAACCTTTTCAAACCAACCATGGCTTTGCATACCATGGCTCTGATACTCCTTGGTTCTATGATCCCTCTTCCTATAATTCCGAGTTCACCCTTTGTGAAGAACCTCAGATTAGCTTCAATTCAAATGTTTTAGATACCAACTTTTCTTATGATCACAAATCTAGTCGGTATTCTCTACCATCCCGCCCTCCTTCCCAACAAGATACTTGTATGTTTACTTTCTCTAATACAAATAATAGTCCTTTCATCATTAAGCCTTGCCACTTCCCTCCTTCAAACCAAAGCCGTAGTAAAGCTTTAGATCTTCAACTAGGCCTCAACTTGCAGTCAAACACAAGAAGCTCTTTGAGAAGGGCGTGA 732 0.4112 MERDVCDLSSTWDGDNGNSVEKRLRLFGFELNPSKNTEGCVKESGEGDESVNSSNSVSSGGEKTVQEKSSAKDSDERKFECQYCFKEFANSQALGGHQNAHKKERMKKKRLQLQARKASINYYLQPFQTNHGFAYHGSDTPWFYDPSSYNSEFTLCEEPQISFNSNVLDTNFSYDHKSSRYSLPSRPPSQQDTCMFTFSNTNNSPFIIKPCHFPPSNQSRSKALDLQLGLNLQSNTRSSLRRA* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1589 243 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
Apr7g1589 243 SUPERFAMILY beta-beta-alpha zinc fingers 75 106 IPR036236 -
Apr7g1589 243 MobiDBLite consensus disorder prediction 47 65 - -
Apr7g1589 243 PANTHER ZINC FINGER PROTEIN 5 16 233 IPR044299 GO:0010090
Apr7g1589 243 PANTHER ZINC FINGER PROTEIN 5 16 233 - -
Apr7g1589 243 MobiDBLite consensus disorder prediction 32 71 - -
Apr7g1589 243 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Apr7g1589 243 Gene3D Classic Zinc Finger 53 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1589 Apr-Chr7 23050279 23051020 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1589 11 120 C2H2 Transcription Factor Family AT5G06650 38.938 7.30e-17 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Apr7g1589 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1589 - - gmx:100527006 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1589 7 23050279 23051020 Apr7g1589 7 23050279 23051020 ECH