Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1582 ATGGCTGAGGCTGTCCTTGAAATTGTGCTTGAGAATATCAGCTCTCTCATTCAGAAAAAACTGGGACTCTTTATGGGTTTCCATCAAGACTTGGAAAGGCTTACCAGCTCGCTCTCTACAGTCAAGGCTACACTTGAAGATGCTGAGGAGAAACAATACTCGAACAGAGCTATCAAAGATTGGCTGCGAAAGCTAAAAGATGCAGCTTATGTGCTGGATGACATCTTGGACGAGTGTGCCACTGAAGCATTGGAGTTGGAGTATCATGGAGTCTCGTGCGGACTATTAGACACGGTACAAACCTCTTGCTTATCCTCTTTTCACCCCAAGCATGTTGTTTCCCGTTACAAGATTGCTAAGAAAATGAAGAGAATAAGAGAGAGATTAGATGAAATTGCTGAAGAAAGGACGAAGTTTCATTTGACTGAGACGGTTCGAGAGAGGAAAGCTGAAGTCATTGCTTGGCGCCAAACAACCTCAATTATTTCTCAACCTCGAGTCTTTGGAAGAGAAGAAGATAAGGATAAAATTGTAGACTTTTTGGTTGTCCATACTTCTCATTTTGAGGATTTATCGGTCTATCCAATTGTGGGTCTTGGTGGACTTGGAAAAACGACACTTGCTCAACTCATTTTCAATCATGAGAGGGTGGTCAACCACTTTGAGCTGAGAATTTGGGTGTGTGTTTCTGAAGATTTCAGCTTGAAGAGAATGACAAAAGCTATCATAGAAGCAGCATCTGGGCGAGCCTGTGAGGATTTGGATCTAGAGCCGTTGCAGAGAAGACTTCGAGATCTGCTTCAAAGGAAAAGATATTTGCTTGTTTTGGACGATGTGTGGGATGATGATCAAGAGAACTGGCATAGGATGAAATCTGTATTGAATTGTGGAGCAAAGGGTACTTCAATTTTGGTCACTACCCGTCTTTCAACGGTTGCATCAATTATGGGAACAACGTCTCCTGATGAACTATCAAAACTATCTGACAATGACTGTTGGGAACTGTTTAAACAACGAGCTTTTGAACCAAATGCAGCAGAAAGGGCAGAGCTTGTTGCGATAGGGAAGGAGATAGTAAGTAAATGTGGGGGAGTGCCTCTTGCAGCAATTGCATTAGGAAGTCTTTTGCGTTTTAAAAGAGAGGAAAAGGAATGGCTCTATGTTAAGGAGAGTAAGCTGTGGAATTTAGATGATGAGAATTTGGTCATACCTGCCTTGCGATTAAGTTACTTGAACTTGCCTGTAAAATTGAGACAATGTTTTGCCTTCTGTGCTATATTTCCCAAAGATGAAATAATAAGCAAGCAACATCTAATAGAACTTTGGATGGCTAATGGATTCATTTCCTCTAATGAAATCTTGGATGCTGAAGATGTGGGTGATGAAGTATGGAATGAATTATACTGGAGATCTTTTTTCCAAGATATTCAGAAAGATGAATTTGGCAGAGTTACAAGTTTCAAGATGCATGATCTTGTTCATGATCTTGCTCAATCTCTTTCGGAAGAGGTATGTTGCGTTAATGACGACAACGGTATAACTACCCAGGCTGAAAGAATCCGACATCTCTTAATTTACAGGCAAAAGTCATATGAACAGGCCAATTCAATTCAGTTGCACCAATTCAAGTCTTTGAAAACCTATACAGTGCCGCAGTACTTCTATGAATATAAAGAGCTTCCAGTTGACATATTAAAATGTTATTCTTTGCGGGTGCTTGAGAGGGAGAGACTAGACAGTTTGCAGCCTAAAATTGGTCAATTAAAATATCTAAGATACTTGAATATTTCTCATGGTAATTTTCGAACTCTTCCAGAATCCCTATGTGAACTGTTGAATCTGGAAATTTTGAAATTAGACTATTGCAATCATCTTCAAAGGTTGCCGATTAATTTGGCACGCTTAAGAGCTCTACAACATCTATCTTTGAGGTTTTGCCACAGACTGTCAAGCTTGGCACGTCATATGGGGATGATGACTTCCCTAAGGACGTTAAGCAGGTATATTATTGGCGACAAAAGAGGATTCCTTTTGACAGAACTGGGTCGACTAAACCTTAAAGGAGAGCTTCTCATCAAGCACTTGGAGAGGGTCAAAAGAGTTGGGGATGCTCAAGAAGCCAATATGTCGACTAAGCACCTAAATTCATTGCTGTTATCATGGAACATAAATGAAGAGTCTGAATTACAAGAAAAAGCTGAACAGATTCTTGAAGTGCTTCAACCTCGTACCGAACAACTTGAGACTTTGGTTGTGGGAGGATATAAAGGTTCACGTTTTCCACCATGGATGTCTAGTCCTTCTCTCACACATTTAAATCGTCTAGAGTTGGTGGATTGCAATAATTGTTTACAACTTCCGCAGCTGGGGAAACTACCTTCTCTAAAGAGGCTAAGTGTATGTAACATGATTCATATAATACACCTATACGAAGAGTCCTACGACGGTGAAGCAGTTTTCATGGCTCTAGAATTTCTGTTACTGGAGGAAATGCCAAACTTAATAAGGTTAGCAAGGGAGGATGGGGAAAACATGTTTCCGCGCCTTTCCACATTTCAAATTACTGATTGTCCTGAGTTGTTGGATTTGCCCAGCCTTCCATCTATCAATGATCTCCGCATAAAAGGTAAATGCAGGGAAGTGCTAAGTTCAATTCATAAGCTCAGTAGTCTTCAATCCCTAAGTTTCAATTATAATGAGGAGTTAACATGCTTGCCAGATGGGATGCTACAAAACCTTACTTCTCTAAAGAAAATAGAGTTTTATAAGCTCTCCAAACTTGAGATACTTGCAACTAGAATCATTAACCTTAAGGCTATCCAAGAACTGTATATAAGGGGTAGCAGCAGGCTCAAGTCATTGGGTGATGAATCATTGATGGAAGGGTTGAGCTCTCTAAAGAAATTAGAAATTTTGGAATGTTCCAAGTTCAATATGTCGGCAGGTTTTAAATACCTAACATGTCTTGAGGATTTGAATATTGGGAAATGCGAAGAGATGGAATGTTTGGATGAGGCATTACCACATATGACTGCCTTGCAATCATTAAGACTCTGGGATCTTCTAAACCTACAATCCTTGCCAGACTGCTTTGGAAACCTTGCCTTGCTTCGGGAATTAAGAATTTCTAACTGTCCCAAGTTGAGGTGTCTTCCAATGAGCATTCAGTGCCTTAGCGGTCTGAAAACATTGGCAATTTACCGTTGCCCCGAGTTAGAGAAGCGATGTGAGAAAGAAACAGGAGAAGACTGGTCAAAAATAGCTCATGTTCACTTTATTGACATAAGAAACGTACAAATCCAGTACGGCTTAAGGGCCGTTGTATATTCTGACGCAAGGATAAATTATATTTTATTACTTTAA 3363 0.4008 MAEAVLEIVLENISSLIQKKLGLFMGFHQDLERLTSSLSTVKATLEDAEEKQYSNRAIKDWLRKLKDAAYVLDDILDECATEALELEYHGVSCGLLDTVQTSCLSSFHPKHVVSRYKIAKKMKRIRERLDEIAEERTKFHLTETVRERKAEVIAWRQTTSIISQPRVFGREEDKDKIVDFLVVHTSHFEDLSVYPIVGLGGLGKTTLAQLIFNHERVVNHFELRIWVCVSEDFSLKRMTKAIIEAASGRACEDLDLEPLQRRLRDLLQRKRYLLVLDDVWDDDQENWHRMKSVLNCGAKGTSILVTTRLSTVASIMGTTSPDELSKLSDNDCWELFKQRAFEPNAAERAELVAIGKEIVSKCGGVPLAAIALGSLLRFKREEKEWLYVKESKLWNLDDENLVIPALRLSYLNLPVKLRQCFAFCAIFPKDEIISKQHLIELWMANGFISSNEILDAEDVGDEVWNELYWRSFFQDIQKDEFGRVTSFKMHDLVHDLAQSLSEEVCCVNDDNGITTQAERIRHLLIYRQKSYEQANSIQLHQFKSLKTYTVPQYFYEYKELPVDILKCYSLRVLERERLDSLQPKIGQLKYLRYLNISHGNFRTLPESLCELLNLEILKLDYCNHLQRLPINLARLRALQHLSLRFCHRLSSLARHMGMMTSLRTLSRYIIGDKRGFLLTELGRLNLKGELLIKHLERVKRVGDAQEANMSTKHLNSLLLSWNINEESELQEKAEQILEVLQPRTEQLETLVVGGYKGSRFPPWMSSPSLTHLNRLELVDCNNCLQLPQLGKLPSLKRLSVCNMIHIIHLYEESYDGEAVFMALEFLLLEEMPNLIRLAREDGENMFPRLSTFQITDCPELLDLPSLPSINDLRIKGKCREVLSSIHKLSSLQSLSFNYNEELTCLPDGMLQNLTSLKKIEFYKLSKLEILATRIINLKAIQELYIRGSSRLKSLGDESLMEGLSSLKKLEILECSKFNMSAGFKYLTCLEDLNIGKCEEMECLDEALPHMTALQSLRLWDLLNLQSLPDCFGNLALLRELRISNCPKLRCLPMSIQCLSGLKTLAIYRCPELEKRCEKETGEDWSKIAHVHFIDIRNVQIQYGLRAVVYSDARINYILLL* 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1582 1120 Gene3D - 149 320 IPR027417 -
Apr7g1582 1120 Gene3D Ribonuclease Inhibitor 876 1082 IPR032675 -
Apr7g1582 1120 Gene3D Ribonuclease Inhibitor 676 873 IPR032675 -
Apr7g1582 1120 CDD RX-CC_like 2 134 IPR038005 -
Apr7g1582 1120 Gene3D - 326 408 IPR042197 -
Apr7g1582 1120 Gene3D Ribonuclease Inhibitor 517 672 IPR032675 -
Apr7g1582 1120 PRINTS Disease resistance protein signature 193 208 - -
Apr7g1582 1120 PRINTS Disease resistance protein signature 266 280 - -
Apr7g1582 1120 PRINTS Disease resistance protein signature 362 376 - -
Apr7g1582 1120 PRINTS Disease resistance protein signature 961 977 - -
Apr7g1582 1120 Pfam Rx N-terminal domain 5 87 IPR041118 -
Apr7g1582 1120 PANTHER OS05G0414200 PROTEIN 27 930 - -
Apr7g1582 1120 PANTHER DISEASE RESISTANCE PROTEIN RP 27 930 IPR044974 GO:0006952
Apr7g1582 1120 Coils Coil 31 51 - -
Apr7g1582 1120 Gene3D - 409 500 IPR036388 -
Apr7g1582 1120 Pfam NB-ARC domain 171 409 IPR002182 GO:0043531
Apr7g1582 1120 SUPERFAMILY L domain-like 473 1088 - -
Apr7g1582 1120 Gene3D - 5 133 - -
Apr7g1582 1120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 424 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1582 Apr-Chr7 22950297 22954019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1582 190 448 WRKY Transcription Factor Family AT5G45050 23.929 5.99e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1582 - - mtr:MTR_5g035280 1379.77