Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1580 ATGGACTCCAACGCTGTTGTTTCGCTTGATGTCTCGCCGGAGGATTCCCAAGAGGTTCATGTCTTGGCCGTTGATGACAGCCTCGTTGATCGAAAGGTCATTGAGCGCTTGCTCAAAATCTCAGCTTGTAAAGTCACTGCTGTGGATAGTGGAATCAGAGCGCTGCAATTTCTGGGTCTGGACGAGCAGAGAAGAACCTCTGAATCTGATGCTTTTGTCCCAGGTTTGAAGGTGGATCTAATCATCACAGACTATTGCATGCCGGAAATGACCGGTTATGAGTTGCTTAAAAAAATCAAGGAATCGTCCACTTTTAGAGAAATCCCCGTCGTGATCATGTCTTCTGAAAACATTTTACCGCGCATAGACAGATGCTTGGAGGAAGGTGCAGAGGATTTCATAGTGAAGCCAGTGAAGTTATCTGACGTTAAACGTTTGAAAGGTTACATGGCAACGAGGGAGAGCCAAGACAGAGAAAGTGGCGGTGCTGTTGTGGGGATCAACAACAAAAGGAAGCTGCATGACACCTCTGACGTGTCATCATCGCCACCGTCCATTTCTTCAGTTTCATCATCACCATCACCCTCGTCATCTCCTTCATCTTCACCTAGCGTCCTTGATTCTCCAATCAGACGGCTTAAAATGACTAGCACCGATTGA 660 0.4682 MDSNAVVSLDVSPEDSQEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRRTSESDAFVPGLKVDLIITDYCMPEMTGYELLKKIKESSTFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYMATRESQDRESGGAVVGINNKRKLHDTSDVSSSPPSISSVSSSPSPSSSPSSSPSVLDSPIRRLKMTSTD* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1580 219 Pfam Response regulator receiver domain 21 143 IPR001789 GO:0000160
Apr7g1580 219 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 8 216 - -
Apr7g1580 219 SUPERFAMILY CheY-like 19 146 IPR011006 -
Apr7g1580 219 Gene3D - 19 181 - -
Apr7g1580 219 ProSiteProfiles Response regulatory domain profile. 20 151 IPR001789 GO:0000160
Apr7g1580 219 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 216 IPR045279 GO:0009736
Apr7g1580 219 SMART REC_2 19 150 IPR001789 GO:0000160
Apr7g1580 219 MobiDBLite consensus disorder prediction 178 219 - -
Apr7g1580 219 MobiDBLite consensus disorder prediction 152 219 - -
Apr7g1580 219 CDD REC_typeA_ARR 21 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1580 Apr-Chr7 22936789 22937858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1580 9 211 Response Regulator Gene Family AT1G59940 58.796 5.32e-74 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr7g1580 Response_reg 9e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1580 K14492 - gmx:100787696 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1580 7 22936789 22937858 Apr7g1580 7 22936789 22937858 ECH