Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1565 ATGACCCACGAGTCAAGTCACTCAGAACCCTTTGTTACTTTCTTTTCCTCAACAATGACGCCGGGAAGTGACAGTGAAAAAAGTGATGAGCTTATTCGAGTTTTGGTGCAAACGGTTATGAAGCAGATGAGGAGTACTCCACTGAGTGTACCTCCGCACACAGTTGGGCTTGATGAGAGAGTTGAAGAGTTGAAAAAGTTGATTAATGTGAAATCCAACGATGTAAGGGTTTTGGGGTTGTATGGTATGGGTGGGGTAGGCAAAACAACCCTGGCCAAGAGCCTCTTCAACAACCTTGTTGTTCATTTTGAGCTTCGCAGCTTCATTCCAAATGTTAGACAAGTTTCCCAACATGAAGATGGTTTGATTTCTCTTCAAAACAGAATTCATGCTGATCTTTCCAATGGTAGAAAACTGGGTCTCATCAATGATGTTAATGATGGATTTTCAGCTATCAAAAGAATAATACAAGAGAATCGAGTTTTGTTAATCCTAGATGATGTTGATGATGTAAAGCAACTTGATTTTTTGATGGGTAAGAAGGAATGGTTTTATAAAGGAAGTCGGATTCTAATAACGACAAGGGATACACAAGTTTTACCTGAGAGTTATGTTGATGTGCTCTATGAGGTAAGGGAATTGGATTTCTCTTCATCACTTGAATTGTTCTGGTATCATGCAATGAGAAGAAAGAAACCTACAGAGGATCTTTCGGATGTGTCAAAACAAATAGTAGAAAAAACAGGAGGGTTACCTTTGGCTTTGGAGGTTTTTGGGTCTTTTTTGTTTGATAAAAGGACACCACTGGAATGGAAAGATGCTTTGGAGAAGCTGAAACAGATTCGACCTGCTTGTCTTCATGATGTGTTGAAGATTAGTTTTGATGCGTTAGATGAACAAGAGAGATGCATTTTCCTTGACATTGCTTGTTTGTTTGTGCAAATGGAAATGAAGAGAGAAGATGTGGTTGATATATTGGATGGTTGTAATCTTAGAGGAGAGATAGCATTAACAGTCCTCACTGCAAAATCTCTAATTAAAATCATTAATGATGGTGTCCTGTGGATGCATGATCAAGTTAGAGACATGGGAAGGCAAATTGTTCAAAATGAAAGTCTAGTGGATCCTGGTCTACGTAGCAGGCTTTGGGATCGTGCTGAAATCTTGACTGTCTTCAAGAATAAGAAGGGAACAAGAAATGTTCAAGGGATTGTCCTAGATTGTGTTAAGAGAAGAATGGTTAGCTCCATTCCTAGAGATCGCACTGCTGATGAAATTACTCGGGATAACTTTAGAAAAAAGCCCAGTTGTAAAACTGCATCAGCATATATTAAAGAGAGATATAAAAAGTATGTGAGGGAAAGAGAAGAGAAAGCAAAACAGTTTATACTTCATGCAAAGCACTTTCAACCAATGGTTTCATTAAGGCTACTTCAAATTAATTATTCGAGATTGGAAGGACGATCCAGGTGTCTTCGTTCAGGACTCAAGTGGTTACAATGGAAACAATGTCCATTAAGGTGTATGCCTTCTAACTATAATCCTTTGGAACTTGCAGTGTTGGATCTCTCTGAAAGTGATATTGAAACGGTGTGGGGCAGACACAGTAACAAGGTGGCTGAGCAGTTGACGGTTTTAAACCTCACCAGTTGCCATCGTTTGACAGCAACTCCTGATTTAAGTGGGTATCTGTCCCTGAAAAAGATTGTTTTGGAAGAATGCTCTCATCTAACTTGGATTCACGAATCACTAGGAAATCTAAGTACCTTAATTCACTTGAACCTGAGCCTATGCTCTAACCTTATCGAACTACCCGGTGATATGTCTGGCCTCAAACTTCTCGAGGACCTTATTCTTTCTGGCTGCTGGAAATTGAAAGCATTGCCCAAAGACTTAAGCCGCATGGTTAATTTAAAACAACTTCTTCTTGATGACACTGCTATAACTGAGCTACCTGAGTCCATCTTTCACCTGACAAAACTTGAAAAGTTGAGTGCAAATAAATGCCAGTATCTGAAGAGGTTACCTAACTGCATTGGGAAACTGACCTCACTGCAAGAATTGTCACTAAACAATACACCATTAGAGGAATTGCCAGATTCTGTTGGTTCGTTGGAAAACCTTGAGACCCTTGGTTTGGTGGGGTGTAAATCACTCTCCGTGATTCCTAACTCTATTGGGAAAATAATTTCATTAACACAACTATTTTTGAACGTCAGTGGAATTAAGGAATTGCCTGCTTCTATTGGTTCTTTATCATATTTAAGGAAATTGTCTGTTGGAGGCTGCACTTCTCTTGACAAATTGTCCGTGTCAATAGAAGCATTAGTTTCTATTGTTGAGCTTCAGTTAGATGGAACATCAATTACCTATTTGCCAGATCAAATTGGGGCCTTGAAAATGCTAGTAAAGCTTGAGATGAGAAATTGTCAGCATCTCAGGTTTCTACCAGAATCATTTGGCTGCATGTCAGCTCTTGCCATCTTGGACATGCATGAGACAAATATTACTGAATTGCCAGAGTCAATAGGAATGTTGGAAAATCTTATTCGGTTGAGATTAGACATGTGCAAACAGCTACAAAGGCTTCCATCTTCCATTGGAAATTTGAAATCCTTGCGATGGTTAATGATGAAGGAAACTGCACTAACGAATCTACCTGATAGCTTTGGGATGCTAACAAGCCTGGTAAAACTTGACATGAAAAGAAAGCCCTATCTTAATGGGGTTGGAACCAGCATGCCCACTGGGATAACAATTCCTAACAAACTAGAAGAACCTAATTCAGAGGCGATCTTAACTTCTTTTTGCAATCTTACCTTGCTGGAAGAGGTAGATGCTCATGGGTGGCAACTATATGGCAAAATTCCAGATGACTTTGGAAAGCTATCGTCACTAGAAACTTTAATTTTATGCCACAACAATATTTGCAGTCTTCCAGTCAGCATGACAGGTCTCTCTTATCTCAAAAAGCTTAGGTTATCATATTGCAGGGAGCTCGTGTTTCTGCCTCCTCTTCCCTCTTGCTTAGAAGAGCTTAATCTTGCAAACTGTACTGCAGTACAGTACATATCCGATATTTCAAACTTGGAGCGCTTAGAGGAGCTGAACCTTACAAATTGTGAAAAGGTGGTGGATATACCAGGTCTTGAACATTTGAAGTCCTTAAGAAGGTTGTACATGAATGGTTGCATTGGATGCCACCTTGTCGTAAAGAGAAGATTTTCTAAGGTTCTACTTAAAAAATTACAGATTTTGATTATGCCTGGAAACACAGTTCCAGATTGGTTTACAGCGGAACCAGTTGTCTTTTCCAAGCGAAGAAACCGCGAGCTTAAAGGTATTATTTGTTTTGGCGTGCTTTCTTTCAACAATATACCAGAAAACCGAAGAGAAGAGCTGCAGTTAGTGGATGTTCAAGGGAAAATCTTTAATATGACGGATAATGTATATAGCACAACGTTTCGCCTGCTAGGAGTACCTAGGACAAATGAAGAGCACATTTTTTTGCGCAGATTTGGGGTTCAGTCTTCGTTAGTTTTTGAGTTAAAAGATAAATATACCTTACATTTGACAAAGCGAAACCCACCCTTTGTTGAGGGGCTGGAGCTGAAGAACTGTAGAATTCATTTAGTTTTTGAAGGGGATGATGATTATGAGGAAGATGAAGGATCACTAGACGAAAGTCAATACTCCGTTTCACAAAAATTAGCCAAGTTCTTCAACTTAACTGCAGAATATGACCCATGTGGATGA 3756 0.394 MTHESSHSEPFVTFFSSTMTPGSDSEKSDELIRVLVQTVMKQMRSTPLSVPPHTVGLDERVEELKKLINVKSNDVRVLGLYGMGGVGKTTLAKSLFNNLVVHFELRSFIPNVRQVSQHEDGLISLQNRIHADLSNGRKLGLINDVNDGFSAIKRIIQENRVLLILDDVDDVKQLDFLMGKKEWFYKGSRILITTRDTQVLPESYVDVLYEVRELDFSSSLELFWYHAMRRKKPTEDLSDVSKQIVEKTGGLPLALEVFGSFLFDKRTPLEWKDALEKLKQIRPACLHDVLKISFDALDEQERCIFLDIACLFVQMEMKREDVVDILDGCNLRGEIALTVLTAKSLIKIINDGVLWMHDQVRDMGRQIVQNESLVDPGLRSRLWDRAEILTVFKNKKGTRNVQGIVLDCVKRRMVSSIPRDRTADEITRDNFRKKPSCKTASAYIKERYKKYVREREEKAKQFILHAKHFQPMVSLRLLQINYSRLEGRSRCLRSGLKWLQWKQCPLRCMPSNYNPLELAVLDLSESDIETVWGRHSNKVAEQLTVLNLTSCHRLTATPDLSGYLSLKKIVLEECSHLTWIHESLGNLSTLIHLNLSLCSNLIELPGDMSGLKLLEDLILSGCWKLKALPKDLSRMVNLKQLLLDDTAITELPESIFHLTKLEKLSANKCQYLKRLPNCIGKLTSLQELSLNNTPLEELPDSVGSLENLETLGLVGCKSLSVIPNSIGKIISLTQLFLNVSGIKELPASIGSLSYLRKLSVGGCTSLDKLSVSIEALVSIVELQLDGTSITYLPDQIGALKMLVKLEMRNCQHLRFLPESFGCMSALAILDMHETNITELPESIGMLENLIRLRLDMCKQLQRLPSSIGNLKSLRWLMMKETALTNLPDSFGMLTSLVKLDMKRKPYLNGVGTSMPTGITIPNKLEEPNSEAILTSFCNLTLLEEVDAHGWQLYGKIPDDFGKLSSLETLILCHNNICSLPVSMTGLSYLKKLRLSYCRELVFLPPLPSCLEELNLANCTAVQYISDISNLERLEELNLTNCEKVVDIPGLEHLKSLRRLYMNGCIGCHLVVKRRFSKVLLKKLQILIMPGNTVPDWFTAEPVVFSKRRNRELKGIICFGVLSFNNIPENRREELQLVDVQGKIFNMTDNVYSTTFRLLGVPRTNEEHIFLRRFGVQSSLVFELKDKYTLHLTKRNPPFVEGLELKNCRIHLVFEGDDDYEEDEGSLDESQYSVSQKLAKFFNLTAEYDPCG* 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1565 1251 SMART LRR_typ_2 729 752 IPR003591 -
Apr7g1565 1251 SMART LRR_typ_2 823 846 IPR003591 -
Apr7g1565 1251 SMART LRR_typ_2 635 658 IPR003591 -
Apr7g1565 1251 SMART LRR_typ_2 682 705 IPR003591 -
Apr7g1565 1251 SMART LRR_typ_2 870 892 IPR003591 -
Apr7g1565 1251 SMART LRR_typ_2 963 986 IPR003591 -
Apr7g1565 1251 SMART LRR_typ_2 776 799 IPR003591 -
Apr7g1565 1251 PANTHER TMV RESISTANCE PROTEIN N-LIKE 24 1203 - -
Apr7g1565 1251 Gene3D - 33 206 IPR027417 -
Apr7g1565 1251 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 1203 IPR044974 GO:0006952
Apr7g1565 1251 Gene3D Ribonuclease Inhibitor 629 811 IPR032675 -
Apr7g1565 1251 Gene3D - 214 298 IPR042197 -
Apr7g1565 1251 Gene3D Ribonuclease Inhibitor 921 1008 IPR032675 -
Apr7g1565 1251 PRINTS Disease resistance protein signature 77 92 - -
Apr7g1565 1251 PRINTS Disease resistance protein signature 155 169 - -
Apr7g1565 1251 PRINTS Disease resistance protein signature 248 262 - -
Apr7g1565 1251 PRINTS Disease resistance protein signature 703 719 - -
Apr7g1565 1251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 308 IPR027417 -
Apr7g1565 1251 SUPERFAMILY L domain-like 355 810 - -
Apr7g1565 1251 Gene3D Ribonuclease Inhibitor 1009 1088 IPR032675 -
Apr7g1565 1251 Pfam NB-ARC domain 61 281 IPR002182 GO:0043531
Apr7g1565 1251 Gene3D Ribonuclease Inhibitor 812 909 IPR032675 -
Apr7g1565 1251 Gene3D Ribonuclease Inhibitor 412 628 IPR032675 -
Apr7g1565 1251 SUPERFAMILY L domain-like 774 1095 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1565 Apr-Chr7 22738799 22745278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1565 704 899 WRKY Transcription Factor Family AT4G12020 32.323 5.34e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1565 - - gmx:100784137 1877.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1565 7 22738799 22745278 Apr7g1565 7 22738799 22745278 ECH
Apr7g1565 7 22738799 22745278 Apr7g1565 7 22738799 22745278 PCT