Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1559 ATGGATTATCAGCTTCTACATATAGTAGCACTGCTGACAGTGATAGCATTTGGAGGAGACATAAGGAAAACTACAGAAGCATGCAATTCATATGACTTGGAAGGTTTGATGGGCTTCAAGAATGGAATTCAGATGGATACATCTGGTCGTTTGGCTAAGTGGGTTGGTAACAGTTGCTGTGACTGGGAAGGTATTGTCTGTGAAAATGCAACCACTAAAGTGACACAGATCCACCTTCCAGGGTTCATTGATAAAGATTTGTTTCAAACTCAGATGGTGGGGCAGCTTTCTCCCTCCATAACACTCGTCACCTCTCTTGAAATCCTTGATCTTGGAGGTTTAGTTGGCCTCAGTGGAACAATTCCACAAACAATTGGTTTGCAACTGCCAAAGCTCAAAAAACTCTACCTTTATGGCAACAATTTAACTGGCCCAGTACCAGAAAGCATAGGTGAGTTACCAAACCTCCAGGAACTGGCACTGCATGAAAATAGGTTATCAGGGTCGATCCCTTCTAGCCTTGGAAGCTTAAAAAACCTCAAAAGTTTGCTGCTTTACTCAAACCAAATTTCAGGTACAATACCACTCTCACTTGGGAATTTGACAAATCTGGTAGAATTGGATATTCATGACAATGCTCTTACTGATCATATACCCAATAGCATTGGTCAGATGCAGACTCTGGAAAAGCTTGATCTTTCAAGCAATATGCTAAGTGGGAACATTCCTTCTTCACTAACCAATTTAACTGCCATTTCAGTTTTGTATATGGACACCAATTATCTTGAGGGAACCATCCCATTTCCCTCAAGATCTGGTGAAATGGCTTCTCTAGGCTTCTTAAGACTCCACAATAACCATCTAAATGGAAACATACCTCCCAGTTTTGGCTACCTGGTTTCTCTTCAAAGAGTCTCATTATCAAACAACAAACTTGAAGGAGCATTGCCTTCTAGTTTGGGCAATTTGCTTTCTTTGACAGAGCTTTACCTCAGTGACAACTCTTTTTCTAGCCAAATACCAAAATCAATAGGCCAACTTTCTCAGCTCATTATGTTGAACATTTCCAATAATTTAATTGAAGGGCCATTACCTCAAGAGATGTCTTCCCTTCAAAATCTTCAAACTCTTGATCTTTCTTTCAACCCTCTGAACCTCTCAGCCATCCCAACATGGCTATCAAATCTATCATCACTTTCCCGAATTTACCTTGCAGGCTGTGCAATCCAAGGCCAAGTGCCAAACATTTTGCAAACAACGGATAGTCCAATACAGGAACTGGACTTATCAATGAACCTTCTCAGTGGAACCATACCATCATGGATAGGATCCTTCAGTCAGCTCTACTTGTTAAACCTCTCAAGAAATTCACTTGATTCACACATACCTGATTCTGTTGCAAACTTGCATGATCTGAGCGTTCTTGATCTTCACTCAAACAAGTTAACAGGATCCATAACTGGAGCATTTGACATTGAACAAGGTACTTCTGGGGGATCATTAACATACATTGATCTTTCTGATAATAACTTCTCAAGTGGAGTTGAGGCAATTGGTGTCGGAGGGCAGTTTAATATTCAGTACCTGAATTTATCTCATAACCTTCTGAAGGGTACATTGCCAAGTTCCCTTGGGAGACTGAATTCCATTCACAGTTTGGACTTAAGCTTCAATGAATTAGACTCCAACTTGCCAGAAGTGCTGGCAAAATTGACCTTGTTGGAGAAACTGAAGCTACAAAAAAACCACTTCAGTGGTAATATACCCAATGCATTTCTCAAGTTGAGAAAGCTGAAGGAATTGGATTTATCAGATAATGTACTTGAAGGGGAAATTCCAGAAGGAAAGCCTCTAATTGACTTTCCTGGAAGTTCTTATTCTGGGAATAAAGGGTTGTGTGGGAAGCCTCTTGGTCCATGTAAACTTTGA 1929 0.4044 MDYQLLHIVALLTVIAFGGDIRKTTEACNSYDLEGLMGFKNGIQMDTSGRLAKWVGNSCCDWEGIVCENATTKVTQIHLPGFIDKDLFQTQMVGQLSPSITLVTSLEILDLGGLVGLSGTIPQTIGLQLPKLKKLYLYGNNLTGPVPESIGELPNLQELALHENRLSGSIPSSLGSLKNLKSLLLYSNQISGTIPLSLGNLTNLVELDIHDNALTDHIPNSIGQMQTLEKLDLSSNMLSGNIPSSLTNLTAISVLYMDTNYLEGTIPFPSRSGEMASLGFLRLHNNHLNGNIPPSFGYLVSLQRVSLSNNKLEGALPSSLGNLLSLTELYLSDNSFSSQIPKSIGQLSQLIMLNISNNLIEGPLPQEMSSLQNLQTLDLSFNPLNLSAIPTWLSNLSSLSRIYLAGCAIQGQVPNILQTTDSPIQELDLSMNLLSGTIPSWIGSFSQLYLLNLSRNSLDSHIPDSVANLHDLSVLDLHSNKLTGSITGAFDIEQGTSGGSLTYIDLSDNNFSSGVEAIGVGGQFNIQYLNLSHNLLKGTLPSSLGRLNSIHSLDLSFNELDSNLPEVLAKLTLLEKLKLQKNHFSGNIPNAFLKLRKLKELDLSDNVLEGEIPEGKPLIDFPGSSYSGNKGLCGKPLGPCKL* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1559 642 PRINTS Leucine-rich repeat signature 228 241 - -
Apr7g1559 642 PRINTS Leucine-rich repeat signature 371 384 - -
Apr7g1559 642 Gene3D Ribonuclease Inhibitor 271 524 IPR032675 -
Apr7g1559 642 Gene3D Ribonuclease Inhibitor 30 197 IPR032675 -
Apr7g1559 642 Gene3D Ribonuclease Inhibitor 200 270 IPR032675 -
Apr7g1559 642 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 641 - -
Apr7g1559 642 SMART LRR_typ_2 371 396 IPR003591 -
Apr7g1559 642 SMART LRR_typ_2 129 152 IPR003591 -
Apr7g1559 642 SMART LRR_typ_2 547 570 IPR003591 -
Apr7g1559 642 SMART LRR_typ_2 323 347 IPR003591 -
Apr7g1559 642 SMART LRR_typ_2 595 617 IPR003591 -
Apr7g1559 642 SMART LRR_typ_2 299 322 IPR003591 -
Apr7g1559 642 SMART LRR_typ_2 445 468 IPR003591 -
Apr7g1559 642 SMART LRR_typ_2 275 298 IPR003591 -
Apr7g1559 642 SMART LRR_typ_2 201 225 IPR003591 -
Apr7g1559 642 SMART LRR_typ_2 571 594 IPR003591 -
Apr7g1559 642 SMART LRR_typ_2 153 177 IPR003591 -
Apr7g1559 642 SMART LRR_typ_2 469 492 IPR003591 -
Apr7g1559 642 SUPERFAMILY L domain-like 28 313 - -
Apr7g1559 642 Pfam Leucine rich repeat 130 190 IPR001611 GO:0005515
Apr7g1559 642 Pfam Leucine rich repeat 424 482 IPR001611 GO:0005515
Apr7g1559 642 Pfam Leucine rich repeat 325 384 IPR001611 GO:0005515
Apr7g1559 642 Pfam Leucine rich repeat 203 262 IPR001611 GO:0005515
Apr7g1559 642 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 3 641 - -
Apr7g1559 642 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Apr7g1559 642 Gene3D Ribonuclease Inhibitor 526 640 IPR032675 -
Apr7g1559 642 SUPERFAMILY RNI-like 271 613 - -
Apr7g1559 642 SMART LRR_sd22_2 177 198 - -
Apr7g1559 642 SMART LRR_sd22_2 371 398 - -
Apr7g1559 642 SMART LRR_sd22_2 201 217 - -
Apr7g1559 642 SMART LRR_sd22_2 323 349 - -
Apr7g1559 642 SMART LRR_sd22_2 595 618 - -
Apr7g1559 642 SMART LRR_sd22_2 225 251 - -
Apr7g1559 642 SMART LRR_sd22_2 129 155 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1559 2 642 Receptor kinase-like Gene Family AT4G08850 31.851 2.81e-85 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1559 - - gmx:100799647 1061.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1559 7 22677892 22679837 Apr7g1559 7 22677892 22679837 ECH
Apr7g1385 7 20984619 20989074 Apr7g1559 7 22677892 22679837 PCT