Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1554 ATGGCTAAAAATGATGACTTGAAGCTTTTGGGTGCCTGGTTCAGCCCATTTGCTCTGAGGGTGCAAATTGCCCTTAACCTTAAGGGCTTAGACTATGAGAATATTGAAGAGACCTTGAACCCCAAAAGTGACCTGCTTCTTCAGTCCAACCCTGTCCACAAGAAAGTCCCAGTTCTCCTCCATGCAGGTAAACCCATCTGTGAATCTTCCATCATAGTTGAGTATATTGATGAGGTTTGGACCAATGCTCCTTCCATCCTTCCAACAAATGCTTATGATCGAGCTATTGCTCGATTCTGGACTGCCTACGTCGACGAGAAGGCATTCGTGTTCTTGCGAAATATTCTAATGAGTGAAGATGATGAAGAAAAGAAGGCACTCTTTGGGCAAATGGAAGAAGTGCTTGACAGGATGGAAGAAGCGTTGAAAAAGTACAGTGAAGGAAAGGCCTATTTTGGAGGAGATACAATTGGATGCATTGATATTGCTTTTGGGAGCTTTTTGAGATGGATCAATGTGATAGAGAAGATGAATGGAAGGATAGTGCTTGATGAAGCAAAGAACCCTGTTTTGGCCAAATGGGCTGAAACTTTTTCTGTTGATCCTGCTGTGAATGGCCTTCTACCAGAGACTGATAAGCTTATTGAGTATGCAAATGTTCTCAAGCAAAAAATGGCTGCTATGAAGCTGCAAAATAATTAG 702 0.4231 MAKNDDLKLLGAWFSPFALRVQIALNLKGLDYENIEETLNPKSDLLLQSNPVHKKVPVLLHAGKPICESSIIVEYIDEVWTNAPSILPTNAYDRAIARFWTAYVDEKAFVFLRNILMSEDDEEKKALFGQMEEVLDRMEEALKKYSEGKAYFGGDTIGCIDIAFGSFLRWINVIEKMNGRIVLDEAKNPVLAKWAETFSVDPAVNGLLPETDKLIEYANVLKQKMAAMKLQNN* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1554 233 Gene3D - 87 229 - -
Apr7g1554 233 SFLD Glutathione Transferase (cytosolic) 3 229 IPR040079 -
Apr7g1554 233 Pfam Glutathione S-transferase, C-terminal domain 100 199 IPR004046 -
Apr7g1554 233 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Apr7g1554 233 SUPERFAMILY GST C-terminal domain-like 86 221 IPR036282 -
Apr7g1554 233 PANTHER GLUTATHIONE S-TRANSFERASE U17 6 219 - -
Apr7g1554 233 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 219 IPR045073 -
Apr7g1554 233 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 228 IPR010987 -
Apr7g1554 233 SUPERFAMILY Thioredoxin-like 6 107 IPR036249 -
Apr7g1554 233 Coils Coil 124 144 - -
Apr7g1554 233 CDD GST_C_Tau 91 221 IPR045074 GO:0004364|GO:0006749
Apr7g1554 233 SFLD Main.3: Omega- and Tau-like 3 229 IPR045073 -
Apr7g1554 233 CDD GST_N_Tau 7 80 - -
Apr7g1554 233 Gene3D Glutaredoxin 1 86 - -
Apr7g1554 233 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1554 Apr-Chr7 22649424 22650483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1554 4 227 Glutathione S-transferase Gene Family AT1G10370 55.556 4.28e-85 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1554 K00799 - gmx:547576 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1554 7 22649424 22650483 Apr7g1554 7 22649424 22650483 ECH
Apr3g0858 3 22472087 22473661 Apr7g1554 7 22649424 22650483 PCT
Apr7g1554 7 22649424 22650483 Apr7g1554 7 22649424 22650483 PCT