Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1552 ATGTCTCTCAATTCCTTGACCTTAACCATTCTCATACTCTTCTTAATCATCTTCCTCTCCGTGTCCACATCCACATCGCACAACACATGCTCTTCCACTTCCACTTCCACTTGCCCTCCCTTCCCACCCAACCCACCATTTCCATTCTCATCCTCCCCAGGATGTGGCCACCCTTCCTTCCAATTCAAATGCTCCACCCCTCACTCCCTAATCTCCATTAACAACATCTCCTTCTCCATCCTCACATACAACCCAAACACGCCCTCAATACTCCTCACCCCTCTCCCAAGAGCAAACACCACCACCTGCACCCCTTTCCCCTCCATCCCCAACCGCTCCATCAACCTCTCCTCCACCCCCTTCCGAATCTCAGACGCTTCCTGTTCGCGCCTCTCCTTCCTGCATCCATGCACTGCCCCCAACTGCACCCACTGCCCCGACCAATGCCACCTCATCAACAACCCCACCCATCTCCTCCGCCACTGCACTTCCACCCACCACTCTCCCTCCGATTCACCATCAACCTGCCAAACCGACGTTCTTGCTTTCCTCGACCAAATCCTCAAATCCGGAATCTTACTCGAATGGGACCAATCCCAAGACCCTTACTTCACCAACTGCACCACTTGCCGTGCCAACAACGGACTCTGCGGCTTCAATTCTTCACACCCAGCTAAACCATTCCTCTGCTTCATCTCCCATTCCACAATCACACCTCCTTGGATTCATAAAATCAAGCCCAACAGAATGGCCATCTTCAGCCTCGTTATAGCCTTTGTTTCATTGCTGCTTCTCGTTTCCGTCGCCGCCGTCATTCTCCGCTCCGCCAGGTTCAAATCCTCACCGGCTATTCAAGACCCCACCGCGCTCTTCCTCCACAACCACCGCTCCTTGACCCTTCTACCCCCCGTTTTCACCTACGAAGAATTAGTCTCCTCCACCAACCGCTTCGACCCCAAGCGCAAAATCGGCGACGGCGGGTTTGGTTCCGTCTACCTCGCCCACCTCCGCGACGGGACTATCGCGGCGGTGAAGCACCTCCACCGGCAACACGCCACTGCCGCGTTCTCCACCAAGTCCTTCTGCAACGAGATTCTCATCCTCTCTTCGATAAACCACCCGAACCTCGTGAAGCTCCACGGCTATTGCAGTGACCCGAGAGGTTTGCTTCTGGTCTACGATTACGTCCCCAACGGAACCCTAGCGGAGCATTTGCACAATCGAAAGGGATCGCTGACGTGGCAGGTGAGGCTGGACATTGCGTTACAAACGGCCTTAGCCATGGAGTACCTTCACTTCTCGGTTGTACCGCCGGTGGTTCACAGAGACATAACGTCGTCGAATATTTTCGTGGAAAGGGACATGAGGATCAAGGTGGGTGACTTCGGGCTCTCGAGGCTTTTGGTGTTGCAGGACACGACGTCGTCTTCGAACGGGTTTGTTTGGACCGGGCCGCAAGGGACGCCCGGGTATTTGGATCCGGATTATCACCGGTCCTTCCGGTTAACCGAAAAGAGTGACGTGTACAGCTTCGGAGTGGTTTTGTTGGAACTAATCTCGGGGCTGAGGGCCGTTGACCAGACGAGGGACAAGCGCGAGATGGCGCTCGCTGATCTCGTCGTCTCCAGGATCCAGATGGGGCAGTTACATCAGGTGCTCGATCCGTTTCTTAAACGTCAAGGCGATAATGACGCCGTCAACGCGGTCGCCGAGCTCGCGTTTCGCTGCGTCGCCGCCGATAAGGATGATCGACCCGATTCCAAGGAGGTGGTGGAGGAGTTGAAGCGGGTTAGGACTCGGACGCGCGGCGGTGACGTGGCGGCGAAGGATTGA 1833 0.5554 MSLNSLTLTILILFLIIFLSVSTSTSHNTCSSTSTSTCPPFPPNPPFPFSSSPGCGHPSFQFKCSTPHSLISINNISFSILTYNPNTPSILLTPLPRANTTTCTPFPSIPNRSINLSSTPFRISDASCSRLSFLHPCTAPNCTHCPDQCHLINNPTHLLRHCTSTHHSPSDSPSTCQTDVLAFLDQILKSGILLEWDQSQDPYFTNCTTCRANNGLCGFNSSHPAKPFLCFISHSTITPPWIHKIKPNRMAIFSLVIAFVSLLLLVSVAAVILRSARFKSSPAIQDPTALFLHNHRSLTLLPPVFTYEELVSSTNRFDPKRKIGDGGFGSVYLAHLRDGTIAAVKHLHRQHATAAFSTKSFCNEILILSSINHPNLVKLHGYCSDPRGLLLVYDYVPNGTLAEHLHNRKGSLTWQVRLDIALQTALAMEYLHFSVVPPVVHRDITSSNIFVERDMRIKVGDFGLSRLLVLQDTTSSSNGFVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLRAVDQTRDKREMALADLVVSRIQMGQLHQVLDPFLKRQGDNDAVNAVAELAFRCVAADKDDRPDSKEVVEELKRVRTRTRGGDVAAKD* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1552 610 ProSiteProfiles Protein kinase domain profile. 317 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1552 610 Gene3D Phosphorylase Kinase; domain 1 293 395 - -
Apr7g1552 610 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Apr7g1552 610 Pfam Protein tyrosine and serine/threonine kinase 320 594 IPR001245 GO:0004672|GO:0006468
Apr7g1552 610 SUPERFAMILY Protein kinase-like (PK-like) 297 594 IPR011009 -
Apr7g1552 610 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 27 603 - -
Apr7g1552 610 ProSitePatterns Tyrosine protein kinases specific active-site signature. 439 451 IPR008266 GO:0004672|GO:0006468
Apr7g1552 610 Gene3D Transferase(Phosphotransferase) domain 1 396 607 - -
Apr7g1552 610 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 603 IPR045274 GO:0007166
Apr7g1552 610 CDD STKc_IRAK 323 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1552 Apr-Chr7 22637893 22639749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1552 8 605 Receptor kinase-like Gene Family AT1G69910 60.606 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Apr7g1552 PK_Tyr_Ser-Thr 3.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1552 - - gmx:100816739 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1552 7 22637893 22639749 Apr7g1552 7 22637893 22639749 ECH