Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1534 ATGGCCGGCGGCGGGGAGCAGCCACCGCGACCCACCATCACTCTTCCTCCACGTTCCTCTGCTTCTATGGACACCCTTTTCAATGGTGGTTTCAGTCCTGGTCCCATGACTCTTCTCTCTAGCTTTTTATCTGATGGTGATGATTGCAAGTCATTCTCTCAGCTTCTCGCCGGAGCTATGACTTCTCCGGCGGCCGGGGCTGCCGGCTTGCTTGATTCACCTGCCTTCTTTTCACCTTCTCAGATGTCTTTTGGAATGTCACACCAGCAGGCCTTAGCGCAGGTTCCTGCAACTACTTCCAATACTACACAACAGCTTATGCCACCCTCAATGACAGAATCCACTGATTACCCTCACTCTGAACAAAGATTACAGCCTTCTTCATTGAATGTTGATAAGCCAGCTGATGATGGCTACAACTGGAGGAAGTATGGGCAGAAACATGTGAAAGGTAGTGAGTTCCCTCGAAGTTATTATAAGTGCACTCATCCAAATTGTCCTGTGAAGAAAAAGGTTGAGCGTTCACTTGAGGGTCATGTAACTGCAATTATTTACAAAGGAGAGCACAATCATCAACGTCCTCATCCTAACAAGCGCTCAAAAGACACTACTTTGAATGAAAATTCAAATGTGCAAGGGAATGTAGATTCAACTTATCAAGGGATAACCACAAACACAATGTCCAAGATGGATCCTGAATCAAGTCAGGCAACAGCTGAACATCTATCAGGAACGAGTGACAGTGAGGAAGTAGGTGATCATGAAACTGAAGTGGATGAGAAAAATGTTGAGCCTGATCCCAAGAGGAGAAATACAGAAGTCACACACTCGGATCCAGCTTCTTCACATAGGACTGTCACTGAGCCTAGAATCATTGTGCAAACAACAAGTGAAGTTGATCTCTTGGATGATGGGTATAGATGGCGAAAATATGGGCAGAAAGTTGTCAAAGGCAACCCATATCCTAGGAGCTATTACAAATGTACAACCCCGGGTTGTAATGTTCGGAAACATGTAGAGAGGGCTTCAACAGATCCTAAAGCTGTCATAACAACATATGAAGGAAAACATAATCATGATGTACCAGCAGCTAAGACTAATAGCCACACTATTGCCAACAATAATGCATCACAGTTAAAATCACAAAATACCAATCCTGAGAGGCATAGTTTTGGCAGCAGAGGAAATGGTGGCAACGAGCAACAGCCTGTTGCACGTCTCCGGCTGAAGCAAGAGCAGATAACTTAG 1248 0.4503 MAGGGEQPPRPTITLPPRSSASMDTLFNGGFSPGPMTLLSSFLSDGDDCKSFSQLLAGAMTSPAAGAAGLLDSPAFFSPSQMSFGMSHQQALAQVPATTSNTTQQLMPPSMTESTDYPHSEQRLQPSSLNVDKPADDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCPVKKKVERSLEGHVTAIIYKGEHNHQRPHPNKRSKDTTLNENSNVQGNVDSTYQGITTNTMSKMDPESSQATAEHLSGTSDSEEVGDHETEVDEKNVEPDPKRRNTEVTHSDPASSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTIANNNASQLKSQNTNPERHSFGSRGNGGNEQQPVARLRLKQEQIT* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1534 415 MobiDBLite consensus disorder prediction 102 129 - -
Apr7g1534 415 MobiDBLite consensus disorder prediction 203 245 - -
Apr7g1534 415 Gene3D WRKY domain 287 363 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr7g1534 415 Gene3D WRKY domain 123 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr7g1534 415 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 7 66 - -
Apr7g1534 415 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 110 414 - -
Apr7g1534 415 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 68 108 - -
Apr7g1534 415 MobiDBLite consensus disorder prediction 246 277 - -
Apr7g1534 415 ProSiteProfiles WRKY domain profile. 297 362 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr7g1534 415 MobiDBLite consensus disorder prediction 185 289 - -
Apr7g1534 415 MobiDBLite consensus disorder prediction 1 28 - -
Apr7g1534 415 SMART WRKY_cls 302 361 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr7g1534 415 SMART WRKY_cls 135 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr7g1534 415 SUPERFAMILY WRKY DNA-binding domain 294 362 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr7g1534 415 MobiDBLite consensus disorder prediction 102 133 - -
Apr7g1534 415 SUPERFAMILY WRKY DNA-binding domain 133 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr7g1534 415 MobiDBLite consensus disorder prediction 185 202 - -
Apr7g1534 415 MobiDBLite consensus disorder prediction 376 415 - -
Apr7g1534 415 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 110 414 IPR044810 GO:0003700
Apr7g1534 415 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 7 66 IPR044810 GO:0003700
Apr7g1534 415 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 68 108 IPR044810 GO:0003700
Apr7g1534 415 Pfam WRKY DNA -binding domain 136 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr7g1534 415 Pfam WRKY DNA -binding domain 303 360 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr7g1534 415 ProSiteProfiles WRKY domain profile. 136 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1534 Apr-Chr7 22512414 22518343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1534 10 56 WRKY Transcription Factor Family AT2G03340 63.265 9.23e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr7g1534 WRKY 9.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1534 - - gmx:100127369 709.523