Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1529 ATGGAAGAGTCAGAGGAGTCCACCAATGCTAACCAGAAATTCACCACCAAAAGAAGGAGCTTCAGGAATGGAGCTAACTCTCATGAGCATAATCATCATCATCACCATCATCAGCATCACCATCTTCATCATCACTATCAGCACCATCATCAGCTGCTACAACAATACTCTACTCAGCTTGGTTTCTGCAACAACCAGAACAAGTATCAGAGATACTACCCTGCTCTTCTTCCTCTACCTTCCCTTATACCTCTCCAACATCTACCTTTCACTCCACCTTTTCCTCAAAACCACACCATCAAATCAAAAACCCATTTGCACAAACCTCCATGCAAACTCAATAGCTCTCCATCATCAGATTACAAGCTCTCTCAACCAGCCCTTGCTCCTGCTCCAAAGGAACTTCAGCAGCAAACTAAGGCATCCTTCAAAGGAGATGATAGCAAGAAACTCATTCCAGCAATGAAGCAACCGGCAGTAATTGTTGCTAGGAGGCCAGACTCTGGTGGCAAAGAAGGCTCAGTGATCTCTCTCCTTGCCAACCACTTCTTGGTAAAATTTGATCCATCACAAAAAATATATCATTACAATGTTGAAATCACCCCTCATCCTTCCAAGGATGTTGCAAGAGTAATCAAACAGAAGTTGGTAACTAACAATTCTGCTGTACTCTCGGGCGCCAGTCCAGCATATGATGGGAGAAAGAATCTCTACAGTTCAGTTGAATTCCAAAATGACAAGCTTGAGTTCTATGTAAGTCTCCCAATTCCGACTACCAAATTGACATCACCTTATGGAGAAATGTATGACTTGAAAGAGAAGCATGAACAGCTTAAACTGTTCAGGATAAATATCAAACTAGTCTCAAAGATTAATGGGAAGGAGTTAACTAATTACTTGAGCAAAGAGGGTGATGATTGGATTCCACTACCACAGGATTATCTACATGCTTTAGATGTAGTTCTTAGGGAAAGTCCAACTGAGAAATGCATACCTGTAGGGAGGTCATTCTATTCAAGTTCAATGGGAAGAAGCAAGGACATTGGTGGAGGAGCTATTGGATTGAGAGGCTTCTTTCAGAGTCTTAGACCAACACAACAAGGACTTGCTCTCAATGTGGATTTCTCGGTAACTGCTTTCCACGAGAGCATTGGAGTGATTCCATACTTGCAGAAACGCCTTGAGTTTCTTCGAGACCTTTCTCAAAGGAAGACAACTCAGCTAACTGGTGAAGAAAGGAAGGAAGTGGAGAAGGCATTGAAGAACATCAGGGTGTTTGTTTGCCACAGGGAAACTGTTCAGAGATACCGTGTCTATAGCTTAACTGAAGCGGCAACTGAAAACCTTTGGTTTGCTGACAGAGATGGGAAGAATCTCAGGCTTGTGAATTACTTTAAAGATCACTATAACTATGACATACAATTCAGAAAGTTGCCATGCTTGCAAATTAGTAGGAGTAAACCTTGTTATCTCCCTATGGAACTTTGTGTGATCTGTGAAGGCCAGAAATTCCTTGGGAAACTTTCTGATGATCAGACCGCTAGAATACTCAAGATGGGATGCCAAAGACCAGGAGAACGAAAAACCATCATTGAAGGAGTCATGAGAGGAGATGTTGGGCCTACTAGTGGTGACCAGGAAAGAGAATTCAAACTCCAAGTCTCAAGAGAAATGACAAAGTTGACTGGGAGAATTCTTCATCCTCCCAAGCTAAAGCTTGGAGAAGGAGGTCATGTGAGAAACCTGACTCCTTCACGTCATGACCGCCAATGGAACCTTCTCGATGGCCATGTCTTTGAAGGAACTACAATTGAAAGGTGGGCACTAATTAGTTTTGGTGGCACACCTGAGCAGAAGTCCAATATCCCCAGATTCATAAACCAGTTATCTCAAAGGTGTGAACAATTGGGCATTTTTCTCAACAAGAATACAGTTACTAGTCCACAGTTTGAATCAAGCCAGATTCTTAACAATGTCACCCTTTTGGAATCTAAACTCAAGAAAATCCAGAAGGCTGCCTCAAACAATCTCCAGCTTCTTATTTGTATAATGGAGAGAAAACACAAAGGGTATGCAGACTTGAAACGAATTGCTGAGACGAGTGTTGGTGTTGTAAGCCAATGCTGCCTGTATCCAAATCTCAGCAAGCTAAGTTCACAATTTTTGGCTAATTTGGCCCTCAAAATCAATGCCAAAGTTGGTGGATGCACAGTTGCCCTTTACAACTCGCTGCCTTCTCAAATTCCGCGCCTTTTTCATATTGATGAGCCAGTAATATTCATGGGTGCTGATGTGACACATCCTCATCCTCTTGATGATTTCAGTCCATCTGTTGCTGCTGTTGTTGGTAGCATGAATTGGCCAACAGCAAACAAATATATTTCAAGAATAAGGTCTCAAACACATAGACAAGAAATCATCCAGGATCTTGGTGCAATGGTGGGGGAATTGCTTGATGATTTTTATCAAGAAGTAGAGAAACTCCCTAACAGAATAATTTTCTTCAGAGATGGGGTTAGTGAAACTCAGTTCTATAAAGTGCTCCAAGAGGAACTTCAGTCCATCAGGTTTGCATGTTCAAGGTTTCCTGGTTATACACCTTTCATCACTTTTGCAGTTGTGCAGAAGAGGCATCACACAAGATTGTTTCCCTTTGAAACTGACCCGTCTTCCCCCCAGAACCATTTTCTATATGAAAACATTCCTCCAGGGACTGTGGTTGATTCAGTGATTACTCATCCAAAGGAATTTGACTTCTATCTATGCAGCCATTGGGGTGTGAAAGGAACAAGTAGGCCTACTCATTACCATGTCTTGTGGGATGAAAATCAGTTTACTTCTGATGAACTTCAGAAATTGGTTTACAATTTATGCTACACTTTTGTTAGGTGTACCAAACCAATTTCTTTGGTTCCTCCTGCATATTATGCACATTTAGCTGCATACAGAGGTAGACTCTACCTTGAGAGATCAGAATCCTTAGGCTTGTTCAGAAGTACATCTACATTATCTAGAGCTGCTCCTCCAAAAACAGCGCCTCTACCTAAACTTAGTGAAAACATCAAGAAGCTCATGTTCTACTGCTAG 3087 0.4179 MEESEESTNANQKFTTKRRSFRNGANSHEHNHHHHHHQHHHLHHHYQHHHQLLQQYSTQLGFCNNQNKYQRYYPALLPLPSLIPLQHLPFTPPFPQNHTIKSKTHLHKPPCKLNSSPSSDYKLSQPALAPAPKELQQQTKASFKGDDSKKLIPAMKQPAVIVARRPDSGGKEGSVISLLANHFLVKFDPSQKIYHYNVEITPHPSKDVARVIKQKLVTNNSAVLSGASPAYDGRKNLYSSVEFQNDKLEFYVSLPIPTTKLTSPYGEMYDLKEKHEQLKLFRINIKLVSKINGKELTNYLSKEGDDWIPLPQDYLHALDVVLRESPTEKCIPVGRSFYSSSMGRSKDIGGGAIGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKTTQLTGEERKEVEKALKNIRVFVCHRETVQRYRVYSLTEAATENLWFADRDGKNLRLVNYFKDHYNYDIQFRKLPCLQISRSKPCYLPMELCVICEGQKFLGKLSDDQTARILKMGCQRPGERKTIIEGVMRGDVGPTSGDQEREFKLQVSREMTKLTGRILHPPKLKLGEGGHVRNLTPSRHDRQWNLLDGHVFEGTTIERWALISFGGTPEQKSNIPRFINQLSQRCEQLGIFLNKNTVTSPQFESSQILNNVTLLESKLKKIQKAASNNLQLLICIMERKHKGYADLKRIAETSVGVVSQCCLYPNLSKLSSQFLANLALKINAKVGGCTVALYNSLPSQIPRLFHIDEPVIFMGADVTHPHPLDDFSPSVAAVVGSMNWPTANKYISRIRSQTHRQEIIQDLGAMVGELLDDFYQEVEKLPNRIIFFRDGVSETQFYKVLQEELQSIRFACSRFPGYTPFITFAVVQKRHHTRLFPFETDPSSPQNHFLYENIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESLGLFRSTSTLSRAAPPKTAPLPKLSENIKKLMFYC* 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1529 1028 SMART Piwi_a_2 679 989 IPR003165 GO:0003676
Apr7g1529 1028 MobiDBLite consensus disorder prediction 109 123 - -
Apr7g1529 1028 MobiDBLite consensus disorder prediction 94 136 - -
Apr7g1529 1028 Pfam N-terminal domain of argonaute 176 322 IPR032474 -
Apr7g1529 1028 Pfam Piwi domain 680 986 IPR003165 GO:0003676
Apr7g1529 1028 SMART DUF1785_2 331 383 IPR014811 -
Apr7g1529 1028 PANTHER PROTEIN ARGONAUTE 7 116 1027 - -
Apr7g1529 1028 SUPERFAMILY Ribonuclease H-like 664 989 IPR012337 -
Apr7g1529 1028 SMART PAZ_2_a_3 391 522 IPR003100 GO:0005515
Apr7g1529 1028 CDD PAZ_argonaute_like 387 499 - -
Apr7g1529 1028 MobiDBLite consensus disorder prediction 1 51 - -
Apr7g1529 1028 Gene3D - 565 741 - -
Apr7g1529 1028 CDD Piwi_ago-like 548 988 IPR045246 -
Apr7g1529 1028 MobiDBLite consensus disorder prediction 28 50 - -
Apr7g1529 1028 Pfam Argonaute linker 1 domain 332 381 IPR014811 -
Apr7g1529 1028 Gene3D - 751 1028 IPR036397 GO:0003676
Apr7g1529 1028 ProSiteProfiles PAZ domain profile. 391 500 IPR003100 GO:0005515
Apr7g1529 1028 Pfam PAZ domain 394 516 IPR003100 GO:0005515
Apr7g1529 1028 ProSiteProfiles Piwi domain profile. 679 989 IPR003165 GO:0003676
Apr7g1529 1028 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 116 1027 - -
Apr7g1529 1028 Gene3D paz domain 377 504 - -
Apr7g1529 1028 SUPERFAMILY PAZ domain 378 536 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1529 Apr-Chr7 22458236 22463879 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1529 101 1028 Eukaryotic Initiation Factors Gene Family AT1G48410 40.821 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1529 K11593 - gmx:100797755 1880.92