Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1521 ATGGATACCATTACAGTGTCAGTGGCAACAACATCCTCGTACTCTTATGATGTTTTCCTCAGTTTTCGGGGTGAGGATACCCGCACAGGTTTCACTGGTTACCTTTATCATGCTTTGTCTGAAAAGGGAATCAACACCTTCATGGATGATCAAGAGCTTTGCCAAGGGGAACAAATCACGCCTTCTCTGATGAGGGCAATTCAAGGATCCAGAATTGCAATAGTGATATTCTCAGAAAACTATGCATCATCTAGTTTTTGTTTGGAAGAACTTGTGAAGATCATGGAGTGCATCAAACACAAGGGAAGGTTGGTTTGCCCTGTTTTTTATCATGTGGATCCATCTGATGTGAGATACCAAAAAGGGTGTTATGGAGAAGCACTAGCCAAGCATGAAACAAGAATCATTGACAAGGAGAAGGTCAAAAGGTGGAGGCTTGCTTTGCAAGAAGCAGCAAATCTCTCTGGTTGGCACTTCCAACATGGGTATGAATATGAGTTCATAAGGAAGATCATTCAAGAGATCTCTAAAAGGATTAATCGTATCCCTTTATATATTGCTAATTACCCAGTTGGGTTAGAGTGTCGAGTGCAAAAGGTAAACTCACTACTTGATGTTGCATCAAATGATGGGGTCCACATGGTAGGGATTAGTGGAATCGGTGGGATAGGTAAAACGACACTTGCGTGTGCAGTGTACAATTGCATTGCTGATCAATTTGAGGGTCTTTGTTTTTTGGCTGACATTAGAGACAATTCAAGGAAGCATGGGTTGGTACAACTTCAGGAGACACTTCTTTCTGATTTGGTCGGGGAGAAGGACATTGAGTTGGGGAATGTAAAGAAAGGGATTCCAGTAATCAAAAGTAGGCTCTGTCATAAAAGAATTCTTTTGATTTTGGATGATGTTGACAACTTGGATCAATTGAAAGCACTTGCTGGTGGACATGATTGGTTTGGTTCTGGTAGCAGAATTATTATAACAACAAGGGACAAGCATTTGCTACGTGTTCATGATGTTGAAAGAATCTATGAAGTAGAAGGATTAAATCATAAAGAAGCCCTTGAATTGTTTATTTGGAGTGCTTTCAAAAGAAAAGATGTTAAACCAACTTATGTGGACATTTCAGAGAGAGTAATTATGTATTCAAATGGCCTTCCATTGTCTCTTGAAATAATAGGATCTGACTTATATGGTAAAACGGTGTCTGAATGGAAATCTGCATTAGACACTTATGAAAGAATTCCTCATGAAAATATTCAGGGAATCCTAAGAGTAAGCTATGATGGCTTAAAGGAATTTGAGAAGGAAATTTTTTTAGACATGGCCTGCTTCTTTAAAGGATATAAGCTAAGTGATGCCACAGACATACTATGTAGTGGTCGTGGCTTTTCTCCAGACTATGCTATCCAGGTTTTAATTGATAAGTGTCTCTTGAACATTGTTCAATGTCGTGTGAGAATGCATAGCCTGATTGAGAATATGGGTAGAGAAATTGTACGGCTGGAATCACCCTCAAAGCCAGGTGAACGCAGTAGATTATGGTTCTCTAGAGATATTCTTCATGTATTAAAAGAAAACAAGGGAACGGACAAAATTGAGTTCATCATGCTGCATTTACTCAAAGATAAAGAAGTAAAATGGAATGGAAAAGCATTAAAGAAGATGGAAAACCTTAAAATATTGGTCATAGAAAATGGTAGCTTTTCGAGAGGACCTAGTTATCTCCCAAAAAGTTTAAGAGTGCTAAAATGGTGTGGATATCCTGAACCATCGCTGCCAGCTCATTTTGATCCAAAGAATCTTGCCATACTGGACTTGTCCATGGGTTTCTTTTCATTCGACAATCAACTGATCATGAAATTTAAGTCTTTAACGGAAATGAAGTTAAGCGGTTGCCAATTTTTAAATCAAGTACCTAACTTGTCTGGAGCACAAAATTTGAAGAAACTGCATCTTGATAATTGCAAGAATTTAGTTGAAGTTCATGATTCTATTGGATTCCTTGATAAACTTGAAGATTTGAATCTTAATTATTGCTCTAGTCTCAAGGTTCTTCCTCAAGGCATCTACTTAACTTCTCTTAAAACGTTGTCCCTTAGATATTGTACAGCTCTCAAGAGTTTTCCAGAAATTCTAGGGAAGATGGAGAACACAAGGTACGTTGGTTTGAGTGCTAGTTCCATAAGAGAATTGCCTTTTTCAATTGGAAATCTTGTTGGGCTCGCAATCCTGTCTTTGGAAAGGTGCAACGGACTTGTTGAACTACCAAGTAGTATTTTTACATTGCCAAAGCTTGAGACCTTGCAAGTTAACAGTTGTGAGGGGCTTACACAAATAAAGAAAGACAAAGCTCAAGAGTTGGAAACATTTTCTTTATGTGTGAGAGATGCCAGTTCCGTTTTGGTTGAAAGAGAAGCTAGATTTTCAAGATGCTCAATGACAGATGCATTTCTTGCTACACTTCTTCCTTGCTTGCATTATGTGACAGTGTTATCCCTTAGATGTAGCAATATTACAATCCTTCCATCATCCATCAAGGCATGTCAGTATTTGAGGATACTTAACTTGAATGAATGCAAGGAGCTTAGAGAAATCTGTGGGCTGCCGCCAAACATAAGATATCTTTCAGCAATAAATTGCCTGTTGTTGACTTCCCAGTCAAAGGAAATGTTGCTGACAGAGGCACTACACAGGGCCAGAGGCACACTTTTCTGTTTTCCAAGTCCAGGATCAGCTGTCCAAGGTTTGTTCAATCATTGTAGCAAGGAACCATCTCTGTCCTTTTGGTTCCATAAAAAGTTCCCTGCAATAACTCTCTGCATCGATGAATTTTCAAGCTGTTATCCTCGCTTTGAGCTGGACCTGATCATTAATAGCAGTCAAGGGTTCTCAAAGTTTTTCATTGTTAGGTCTACAGTTTATCATTCACTTCAGACAAATCATACAACTTTGTTCGATCTGCAGTTCAAGTTTTGCAGCGGCCAATTCAAAGGATTATTTACTGAGAATGGATGGAACCATGTTGAGATTTTGTTATCAGAAAATGCAACATCAGAAGTGGAATGGATGGGAGTTCATGTACAGGAACAAAACACAAGCATGGCAGATATTAGTTTTACAAATCCTGATCCTGAGCCTCCAATAGTTATAGTAGAAAAAAATAGAAGGGTCGTACGCAGATTTAAAAGATCATGA 3198 0.3862 MDTITVSVATTSSYSYDVFLSFRGEDTRTGFTGYLYHALSEKGINTFMDDQELCQGEQITPSLMRAIQGSRIAIVIFSENYASSSFCLEELVKIMECIKHKGRLVCPVFYHVDPSDVRYQKGCYGEALAKHETRIIDKEKVKRWRLALQEAANLSGWHFQHGYEYEFIRKIIQEISKRINRIPLYIANYPVGLECRVQKVNSLLDVASNDGVHMVGISGIGGIGKTTLACAVYNCIADQFEGLCFLADIRDNSRKHGLVQLQETLLSDLVGEKDIELGNVKKGIPVIKSRLCHKRILLILDDVDNLDQLKALAGGHDWFGSGSRIIITTRDKHLLRVHDVERIYEVEGLNHKEALELFIWSAFKRKDVKPTYVDISERVIMYSNGLPLSLEIIGSDLYGKTVSEWKSALDTYERIPHENIQGILRVSYDGLKEFEKEIFLDMACFFKGYKLSDATDILCSGRGFSPDYAIQVLIDKCLLNIVQCRVRMHSLIENMGREIVRLESPSKPGERSRLWFSRDILHVLKENKGTDKIEFIMLHLLKDKEVKWNGKALKKMENLKILVIENGSFSRGPSYLPKSLRVLKWCGYPEPSLPAHFDPKNLAILDLSMGFFSFDNQLIMKFKSLTEMKLSGCQFLNQVPNLSGAQNLKKLHLDNCKNLVEVHDSIGFLDKLEDLNLNYCSSLKVLPQGIYLTSLKTLSLRYCTALKSFPEILGKMENTRYVGLSASSIRELPFSIGNLVGLAILSLERCNGLVELPSSIFTLPKLETLQVNSCEGLTQIKKDKAQELETFSLCVRDASSVLVEREARFSRCSMTDAFLATLLPCLHYVTVLSLRCSNITILPSSIKACQYLRILNLNECKELREICGLPPNIRYLSAINCLLLTSQSKEMLLTEALHRARGTLFCFPSPGSAVQGLFNHCSKEPSLSFWFHKKFPAITLCIDEFSSCYPRFELDLIINSSQGFSKFFIVRSTVYHSLQTNHTTLFDLQFKFCSGQFKGLFTENGWNHVEILLSENATSEVEWMGVHVQEQNTSMADISFTNPDPEPPIVIVEKNRRVVRRFKRS* 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1521 1065 Gene3D - 10 182 IPR035897 -
Apr7g1521 1065 Pfam TIR domain 16 180 IPR000157 GO:0007165
Apr7g1521 1065 PANTHER ARCHAEAL ATPASE 26 1012 - -
Apr7g1521 1065 SMART till_3 15 154 IPR000157 GO:0007165
Apr7g1521 1065 Pfam NB-ARC domain 196 429 IPR002182 GO:0043531
Apr7g1521 1065 Gene3D - 348 432 IPR042197 -
Apr7g1521 1065 Gene3D Ribonuclease Inhibitor 705 899 IPR032675 -
Apr7g1521 1065 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 157 IPR035897 -
Apr7g1521 1065 PRINTS Disease resistance protein signature 214 229 - -
Apr7g1521 1065 PRINTS Disease resistance protein signature 290 304 - -
Apr7g1521 1065 PRINTS Disease resistance protein signature 383 397 - -
Apr7g1521 1065 PRINTS Disease resistance protein signature 690 706 - -
Apr7g1521 1065 SUPERFAMILY L domain-like 535 889 - -
Apr7g1521 1065 Gene3D - 183 343 IPR027417 -
Apr7g1521 1065 ProSiteProfiles TIR domain profile. 14 179 IPR000157 GO:0007165
Apr7g1521 1065 Gene3D Ribonuclease Inhibitor 528 704 IPR032675 -
Apr7g1521 1065 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 441 IPR027417 -
Apr7g1521 1065 SUPERFAMILY "Winged helix" DNA-binding domain 419 525 IPR036390 -
Apr7g1521 1065 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 1012 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1521 Apr-Chr7 22388852 22393248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1521 11 774 WRKY Transcription Factor Family AT4G12020 32.658 1.35e-93 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1521 - - mtr:MTR_5g040490 1335.86