Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1518 ATGACTATTCCAACATTTTTATCCTCCTCCTTTACTTATGAATGGACTTATGATGTTTTCCTCAGTTTTCGAGGTGAGGATACTCGCACCGGTTTCACTGGTAACCTTTACAATGCTCTACTTGAAAAAGGAATCAACACCTTCATAGATGATCAAGAAATTAGAAAAGGAGAAGAAATCACACCAGCTCTAATGAATGCAATCCACAATTCTAGGATTGTCATTGTGGTTCTTTCAGCAAACTATGCATCATCTACATTTTGTTTGGAAGAACTTGTGAAGATCATGGAGTGCATCAAACACAAGGGAGGGCTGGTTTGGCCTGTTTTTTATCAAGTGGATCCCTCCCATGTGAGACATCAAAAAGGGTGTTATGGAGAAGCACTGGCTAATCATGAAGTGAAAATCATTGACAAGGAGAAGGTGAAAAGGTGGAGGCTTGCTTTGCAAGAAGTTGCTGATCTCTCTGGTTGGCATTTGCAACATGGGTACGAATATGAGTTTATGAAGAAGATCATTCAAGAGGTCTCTAAAGAGATTAATCGAACTCCTTTATATGTTGCTAAGTACCCAGTTGGGTTAGAAGCTCGTGTGCAGAAAATAAACTCACTTCTTGATGTTGAATTAGATGATGGAGTCCACATGGTAGGGATTTATGGCATGGGAGGAATAGGTAAAACAACACTTGCATGTGCAGTATACAATGTCATTGTTGATCAATTTGAGAATTTTTGTTTTCTGGCTGATATTAGAGAAAATTCAGTGAAGCATGGGTTGGTACATCTGCAGGAGACACTTCTTTCTGATTTAGGAGGGGAGAAGGAAGTTAAGTTGTGGAATGTAAATAAAGGAATTCCAATAATTAAAAGTAGGCTCTGTCAAAGGAAAATTCTTTTGATTCTTGATGATGTTGACAAATTGGAGCAGCTAGAAGCACTTGCTGGTGGACTAGATTGGTTTGGTTCTGGCAGCAGAGTTATTATAACAACAAGGGATAAGCATTTGCTACATGTTTATGGTGTTGAAAAAACCTACGAAGTAGAAGGATTAAGTCATAAAGAAGCCACTGAATTATTTAGTTGGTGTGCATTCAAAACAAAAGAATTTAATCCTAGTTATATGGACATTTTAAAGAGAGTAATACTTTATTCTAATGGCCTCCCATTGTCTCTTGAAATTATAGGTTCTGACTTGTTTGGTAAAACAGTGTCAGAATGGAATTCTGCATTAGATACATATGAAAGAATTCCTCATCAAAATGTTCATGGAATCCTAAGAGTAAGCTATGATGGCTTAAAGGAATTTGAGAAGCAAATTTTTCTAGATATAACTTGCTTCTTTAAAGGATACAAAATAAATGATGTCATAAGCATGCTACATAGTGGTCGTGGCTCTGCCATAGACTATGTTATCCAGGTGTTGATTGATAAGTGTCTCATAAAAATTGTTCACTATCATGTGAGAATGCATGACTTGATTGAAGATATGGGTAGGGAAATTGTACGGCAAGAATCACCTTTAAAGCCAGGTGACCGCAGCAGATTGTGGTTCTCTAAAGATATTCTTCATGTTTTAAAAGAGAACAAGGGATCCGATAAAATTGAAATCATCATGCTACATCTGCTAAAAAATAAAGAAGTGCAATGGGATGGAAATGCATTAAAGAAGATGGAAAACCTTAAAATATTGGTTGTAGAAAATGCTCACTTTTCCAGAGGTCCCAATCATCTCCCAAAAAGTTTGAGAGTGATAAAATGGTGTGGATACCCTGAACCATTGCTGCCAGATCATTGTGATCCAAAGAAATTTGTCATACTTGACTTGTCTAGGAGTTTCTTTTCATTTGACCAACAATTGATCATGAAATTTAAGTCTCTGAAGGAAATGAAGTTAAGTGGGTGCAATTTACTAAAACAAGTACCTGACCTGTCTGGAGCACCGAATTTAAAGAAACTGAATCTTGATGATTGCAAGAATTTGGTTGAAGTTCATGATTCTGTTGGATTCCTTGATAAACTTGAAGTGTTGAATCTTGATTATTGTACTAGTCTCGAAGTTCTTCCTCGTCGCATCAACTTAACTTCTTTAGAAACCCTGTCCCTTAGGATTTGTACAAGTCTCAAGATTTTTCCAGAAATTTTAGGGAAGATGGAAAACATAAGGTACATTTATTTGAATGATAGTGCCATAATAGAATTGCCTTTTTCAATTGAAAATCTTGTTGGGCTTACAGTGCTGACTCTGAATGGATGCAATGGGCTACTTGAACTACCAAGTAATATTTTTACACTTCCAAAACTTGAGATCTTGCAAGCCAACAGCTGTAAGGGGCTTGCACATGTGAAAAAGGGCAATGCTAAAGAGCAAGAAACAATGTCTTCAAATGTGAGAGATGCCAATTCTTTTCCATTTGAAAGAAATGCTAGTTTAGGCCATTGCTGTCTCACAGATGAATTTCTTGCTACCCTTCTTCCTTGCTTGAACCATGTGACACGTTTATACCTTATTCATAACAATATCACAATCCTTCCATCATGCATCAATGCATGTCACTCTTTGATGGAACTCTATTTGGATGGATGCAAGGAGCTGAGAGAAATCAGGGGGCTGCCACCAAATATAAGACGTCTCTCAGCAGTAAATTGCACGTCATTGACTTCCCAGTCCAAGGGAATGTTGCTGAATAAGGCACTGCACAAGACTGGGGATACATGTTTCTGTTTTCCAGTACCAGCATCAACTATCCAAAGTTTATTCCATCACTGTAGCAGGGGACCATCCCTTTCTTTCTGGTTCCGTAGGGAATTCCCAATGATTACTCTCTGTGTTTTTGGAGCTTTGGATAGCTGTGGTTGCTGTGTACTTGACCTGTTTGTTAATGGCAGTCAAAAGTTCCTTGAGCAGTTCAAATTTATGACTATAGATGATTCAGTCCAGATAAATCATATTATTCTGTTCAATCTGCAGCTCCAATGTCACAGTGATAAATTTGAAAATTTATGCACTATGAATGGATGGAACCATGCTGAGATTTCATTTTCCGAAAATAGAACAGATATTGAATGGATGGGAGTTTATGTAAAGGAACAAAAAAGCACAGAGGATATTCAATTTACAAATCCTGAGAAAATGCCGATACATCATTTTAATGGATCACAGAAAATAGTTACAAGTTCTGGTTATGTTTAG 3189 0.3725 MTIPTFLSSSFTYEWTYDVFLSFRGEDTRTGFTGNLYNALLEKGINTFIDDQEIRKGEEITPALMNAIHNSRIVIVVLSANYASSTFCLEELVKIMECIKHKGGLVWPVFYQVDPSHVRHQKGCYGEALANHEVKIIDKEKVKRWRLALQEVADLSGWHLQHGYEYEFMKKIIQEVSKEINRTPLYVAKYPVGLEARVQKINSLLDVELDDGVHMVGIYGMGGIGKTTLACAVYNVIVDQFENFCFLADIRENSVKHGLVHLQETLLSDLGGEKEVKLWNVNKGIPIIKSRLCQRKILLILDDVDKLEQLEALAGGLDWFGSGSRVIITTRDKHLLHVYGVEKTYEVEGLSHKEATELFSWCAFKTKEFNPSYMDILKRVILYSNGLPLSLEIIGSDLFGKTVSEWNSALDTYERIPHQNVHGILRVSYDGLKEFEKQIFLDITCFFKGYKINDVISMLHSGRGSAIDYVIQVLIDKCLIKIVHYHVRMHDLIEDMGREIVRQESPLKPGDRSRLWFSKDILHVLKENKGSDKIEIIMLHLLKNKEVQWDGNALKKMENLKILVVENAHFSRGPNHLPKSLRVIKWCGYPEPLLPDHCDPKKFVILDLSRSFFSFDQQLIMKFKSLKEMKLSGCNLLKQVPDLSGAPNLKKLNLDDCKNLVEVHDSVGFLDKLEVLNLDYCTSLEVLPRRINLTSLETLSLRICTSLKIFPEILGKMENIRYIYLNDSAIIELPFSIENLVGLTVLTLNGCNGLLELPSNIFTLPKLEILQANSCKGLAHVKKGNAKEQETMSSNVRDANSFPFERNASLGHCCLTDEFLATLLPCLNHVTRLYLIHNNITILPSCINACHSLMELYLDGCKELREIRGLPPNIRRLSAVNCTSLTSQSKGMLLNKALHKTGDTCFCFPVPASTIQSLFHHCSRGPSLSFWFRREFPMITLCVFGALDSCGCCVLDLFVNGSQKFLEQFKFMTIDDSVQINHIILFNLQLQCHSDKFENLCTMNGWNHAEISFSENRTDIEWMGVYVKEQKSTEDIQFTNPEKMPIHHFNGSQKIVTSSGYV* 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1518 1062 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Apr7g1518 1062 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 443 IPR027417 -
Apr7g1518 1062 SUPERFAMILY "Winged helix" DNA-binding domain 420 526 IPR036390 -
Apr7g1518 1062 Gene3D - 185 345 IPR027417 -
Apr7g1518 1062 PANTHER ARCHAEAL ATPASE 27 1013 - -
Apr7g1518 1062 CDD AAA 207 332 - -
Apr7g1518 1062 Pfam TIR domain 17 182 IPR000157 GO:0007165
Apr7g1518 1062 Gene3D - 349 433 IPR042197 -
Apr7g1518 1062 Pfam NB-ARC domain 195 422 IPR002182 GO:0043531
Apr7g1518 1062 Gene3D Ribonuclease Inhibitor 524 699 IPR032675 -
Apr7g1518 1062 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 1013 IPR044974 GO:0006952
Apr7g1518 1062 Gene3D - 11 184 IPR035897 -
Apr7g1518 1062 PRINTS Disease resistance protein signature 215 230 - -
Apr7g1518 1062 PRINTS Disease resistance protein signature 291 305 - -
Apr7g1518 1062 PRINTS Disease resistance protein signature 384 398 - -
Apr7g1518 1062 PRINTS Disease resistance protein signature 691 707 - -
Apr7g1518 1062 Gene3D Ribonuclease Inhibitor 700 900 IPR032675 -
Apr7g1518 1062 SUPERFAMILY L domain-like 536 893 - -
Apr7g1518 1062 SMART till_3 16 155 IPR000157 GO:0007165
Apr7g1518 1062 ProSiteProfiles TIR domain profile. 15 180 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1518 Apr-Chr7 22362899 22366910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1518 11 778 WRKY Transcription Factor Family AT4G12020 31.187 1.19e-88 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1518 - - mtr:MTR_5g040490 1326.23