Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr7g1505 | ATGGCGCTTGTTGGTTTGCTCTTGGTGGGTTTTCTCACAAGGTTTTCGTCTGCCTATGGCTATGGTGGTGGGTGGATCAATGCACATGCTACCTTCTATGGAGGTGGGGCTTGTGGATATGGGAACCTCTACAGCCAAGGGTATGGAACAAACACTGCTGCACTGAGCACAGCTTTGTTCAACAATGGTCTTAGTTGTGGGTCATGCTATGAGATTAGGTGTGTGAATGACCACAGGTGGTGTCTTCCAGGCTCCATTTTGGTCACTGCCACTAATTTCTGCCCACCAAACAATGCCTTGCCTAACAATGCAGGAGGGTGGTGCAACCCTCCTATGCACCACTTTGATCTCTCTCAGCCTGTCTTCTTGCGCATTGCACAATACAGAGCTGGAATTGTGCCTGTGGCATACAGAAGGGTGGCCTGCAGGAGAAGGGGAGGCATAAGGTTCACAATCAATGGTCATTCCTACTTCAACCTAGTCCTCGTAACAAACGTGGGTGGTGCTGGTGATGTGCATGGAGTGGCCATCAAAGGGTCAAGAACTGGGTGGATGCCAATGTCAAGGAACTGGGGTCAGAATTGGCAAAGCAACAACTATCTTAATGGCCAAAGCCTCTCCTTCAAGGTTACCACTAGTGATGGTCGTACTGTGGTCTCCTATAATGTTGCTCCAGCTGGATGGTCTTTTGGCCAAACATACACTGGTGCCCAATTCCGCTAG | 723 | 0.4965 | MALVGLLLVGFLTRFSSAYGYGGGWINAHATFYGGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIRCVNDHRWCLPGSILVTATNFCPPNNALPNNAGGWCNPPMHHFDLSQPVFLRIAQYRAGIVPVAYRRVACRRRGGIRFTINGHSYFNLVLVTNVGGAGDVHGVAIKGSRTGWMPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNVAPAGWSFGQTYTGAQFR* | 241 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr7g1505 | 240 | SUPERFAMILY | PHL pollen allergen | 144 | 236 | IPR036749 | - | |
Apr7g1505 | 240 | PRINTS | Expansin/Lol pI family signature | 34 | 52 | IPR007118 | GO:0005576 | |
Apr7g1505 | 240 | PRINTS | Expansin/Lol pI family signature | 56 | 74 | IPR007118 | GO:0005576 | |
Apr7g1505 | 240 | PRINTS | Expansin/Lol pI family signature | 130 | 146 | IPR007118 | GO:0005576 | |
Apr7g1505 | 240 | PRINTS | Expansin/Lol pI family signature | 184 | 198 | IPR007118 | GO:0005576 | |
Apr7g1505 | 240 | PRINTS | Expansin/Lol pI family signature | 222 | 236 | IPR007118 | GO:0005576 | |
Apr7g1505 | 240 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 35 | 147 | IPR007112 | - | |
Apr7g1505 | 240 | PANTHER | EXPANSIN | 5 | 239 | - | - | |
Apr7g1505 | 240 | Gene3D | - | 147 | 239 | IPR036749 | - | |
Apr7g1505 | 240 | PANTHER | EXPANSIN-A15 | 5 | 239 | IPR002963 | GO:0009664 | |
Apr7g1505 | 240 | Gene3D | - | 12 | 143 | IPR036908 | - | |
Apr7g1505 | 240 | SMART | dpbb_1 | 52 | 137 | IPR007112 | - | |
Apr7g1505 | 240 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 157 | 236 | IPR007117 | - | |
Apr7g1505 | 240 | PRINTS | Expansin signature | 47 | 61 | IPR002963 | GO:0009664 | |
Apr7g1505 | 240 | PRINTS | Expansin signature | 74 | 85 | IPR002963 | GO:0009664 | |
Apr7g1505 | 240 | PRINTS | Expansin signature | 86 | 96 | IPR002963 | GO:0009664 | |
Apr7g1505 | 240 | PRINTS | Expansin signature | 105 | 122 | IPR002963 | GO:0009664 | |
Apr7g1505 | 240 | PRINTS | Expansin signature | 122 | 135 | IPR002963 | GO:0009664 | |
Apr7g1505 | 240 | PRINTS | Expansin signature | 146 | 158 | IPR002963 | GO:0009664 | |
Apr7g1505 | 240 | PRINTS | Expansin signature | 158 | 179 | IPR002963 | GO:0009664 | |
Apr7g1505 | 240 | PRINTS | Expansin signature | 193 | 214 | IPR002963 | GO:0009664 | |
Apr7g1505 | 240 | PRINTS | Expansin signature | 222 | 238 | IPR002963 | GO:0009664 | |
Apr7g1505 | 240 | Pfam | Expansin C-terminal domain | 148 | 225 | IPR007117 | - | |
Apr7g1505 | 240 | SUPERFAMILY | Barwin-like endoglucanases | 12 | 165 | IPR036908 | - | |
Apr7g1505 | 240 | Pfam | Lytic transglycolase | 52 | 137 | IPR009009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr7g1505 | Apr-Chr7 | 22239167 | 22241129 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr7g1505 | 1 | 240 | Expansin Gene Family | AT2G03090 | 78.629 | 5.12e-145 | 404 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr7g1505 | - | - | gmx:100796316 | 477.633 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Apr7g1505 | 7 | 22239167 | 22241129 | Apr7g1505 | 7 | 22239167 | 22241129 | ECH | |
Apr7g1505 | 7 | 22239167 | 22241129 | Apr1g0928 | 1 | 13070199 | 13072223 | ECH | |
Apr7g1505 | 7 | 22239167 | 22241129 | Apr9g2993 | 9 | 36806866 | 36809111 | ECH | |
Apr7g1505 | 7 | 22239167 | 22241129 | Apr6g0206 | 6 | 2171435 | 2172743 | ECH |