Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1504 ATGCCGATGATACTCGAACTCTCCCCACACTTCTTCTTCCCTCAAACCCCAATCCCAAAACCCTTCAAAAACCCTAATCTCAATCTCATAATCACCGCCCAATTTTCTCGGCAACCAAACACCGCCACCTCCGACCGAGGCCTAATTTTCCGGGAAAAGGTTCTCTACCTCAGAAAACTCAACGTTAACCCCGAAAAAGCATTTCAAGAAAACCCCACCCTCCGATCCTCTCGTCTCTCAACCCTAAAATTGGTGGAACAATGCCTCTACTCAATGGGAATTGACCGCTCCGCCATGGGTCGAATCCTCGACATGTATCCCGTGCTTCTCACGTGCGACCCTTATTCCCAATTTTATCCCCTCCTCGATTTCCTCCTCCACGAGGTTCGAATCCCTTTCCCTCACGTTCAAAAATCGATCTTGCGATGCCCCAGGTTGCTGGTTTCCGACGTTGACCACCAATTGAGACCCGCTCTGTGTTTTCTGAGGGAATTAGGGTTCGTTGGGCCCCACTCTCTCACGTGCCAGACCACCCTGCTTCTGGTTTCTAGCGTTGAGGACACCCTTTTGCCCAAGATTGAGTTTTTGAAGAGTTTAGGGTTCACTCATGATGAGGAGATGAATGGGGACGTTGCTGAGCTCAAGAGGTTTCCTCAATATTTCTCTTTTAGTTTGGAAAGGAGGATTAAACCTAGGCACACGATGCTGGTGCAGCATGGCTTGTCACTTCCTTTAGAAGATATGTTGAAGGTTAGTGATGGCGGGTTTAATGCTAGGTTGGTTGAATTACGGTTACGAACACTTGAGGGAGGACAGCAACTGTAA 825 0.4848 MPMILELSPHFFFPQTPIPKPFKNPNLNLIITAQFSRQPNTATSDRGLIFREKVLYLRKLNVNPEKAFQENPTLRSSRLSTLKLVEQCLYSMGIDRSAMGRILDMYPVLLTCDPYSQFYPLLDFLLHEVRIPFPHVQKSILRCPRLLVSDVDHQLRPALCFLRELGFVGPHSLTCQTTLLLVSSVEDTLLPKIEFLKSLGFTHDEEMNGDVAELKRFPQYFSFSLERRIKPRHTMLVQHGLSLPLEDMLKVSDGGFNARLVELRLRTLEGGQQL* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1504 274 Gene3D Transcription termination factor 3, mitochondrial 31 269 IPR038538 -
Apr7g1504 274 SMART mt_12 65 95 IPR003690 GO:0003690|GO:0006355
Apr7g1504 274 SMART mt_12 100 132 IPR003690 GO:0003690|GO:0006355
Apr7g1504 274 SMART mt_12 211 242 IPR003690 GO:0003690|GO:0006355
Apr7g1504 274 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Apr7g1504 274 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Apr7g1504 274 Pfam mTERF 184 256 IPR003690 GO:0003690|GO:0006355
Apr7g1504 274 Pfam mTERF 65 167 IPR003690 GO:0003690|GO:0006355
Apr7g1504 274 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 33 205 - -
Apr7g1504 274 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 205 269 - -
Apr7g1504 274 PANTHER CGI-12 PROTEIN-RELATED 205 269 IPR003690 GO:0003690|GO:0006355
Apr7g1504 274 PANTHER CGI-12 PROTEIN-RELATED 33 205 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1504 Apr-Chr7 22233619 22234816 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr7g1504 mTERF 2.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1504 K15032 - gmx:100785219 331.643