Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1503 ATGATCTCTTCACAGCAAAACCAAAATACTCACACCTCTTCTTACCCTTTTGCATCTCCATCAATGGGAATGGTCTATGAAGACATGATGGGGTCTCTCTCTCTTGGTTCCAACTATGCTACTGTTTCAAATAATAATTTTTCTTTACCTCAAGATAGTTACTATTATGCCTGCAAGAGTTCTGAGGTGGAACATGGGAGAAGCACAAGCTGGAGTTTTCCATTCACGAGGGAGTTTCTTTCCTCAAGCTTTGAAGATGTGGAGGGAAAAGGTTCTGATTGTTGCAGTGATGGGGTAGGGGAAAATAGTGAGAGTCATGAGAAAATTAACCACGATGCCAAGTTCAGTGAAGAGAATAACCCTAATGAAATCACTGTTAGTGGCAAAGAGGTAGATAGTGGACACTCCAAACTATGTGCAAGAGGACATTGGAGGCCTGCTGAAGATTCCAAGCTGAAGGAGCTTGTGGCTCTTTATGGTCCTCAGAACTGGAATCTCATAGCTGAAAAATTGGAAGGGAGATCAGGAAAGAGTTGTAGGTTGAGGTGGTTCAACCAGTTGGATCCAAGGATCAACAGAAGAGCATTCAGTGAAGAGGAGGAAGAGAGGCTAATGCAGGCGCATAGAATGTATGGCAACAAATGGGCCATGATTGCAAGGCTTTTTCCTGGGAGAACAGATAATGCAGTGAAGAATCACTGGCATGTTATAATGGCTAGGAAGTACAGGGAACAATCCAGTGCTTATAGGAGGAGGAGAACAAGCCAATCTGTTTACAGAAGAATGGAGCGAAATCCAAGTTTTGTATGCAGCAGAGATAATACCTTAACAACAGAAATAGAACCATCATCACATTCCTATTGTCTCAATCTCCTCCACAATGGAGTAGTACTCAGCAACAATATGACTAGTTTCCCATCCTTCCATGGAATAGCAGCTGGTGGCGGGGTTGAGTTTGGCTTAAATGGTTCTTCACCCCACACGAGCGGTCGGAGAGAAGCAATGTCAAACACCCCACATGTTGGCTTGTGTGCTCAACCAACACCATTTGATTTTTTCTCTGGTGGTAGAAGCAATGACAGGACTTACGAATATGATCATCGTCGTAGCCAATTAGCTGGTTTCTACCCTCATTATGCCCCACAATATGTGATGGCAATGCAACAACTAAACAACAATCACAATTTTTACAGTTTCTCAAATTCCTCAGCATCAACAACTATAGCCAGGGAACCATCATCATCATCATTATCTGTTGCAGAGACGAGTGATAAAGTGGTGATTAGTGACCCCCCAGATGGTGTTCCCCCTCCATTTTTTGACTTCCTTGGAGTAGGAGCCACATGA 1347 0.4328 MISSQQNQNTHTSSYPFASPSMGMVYEDMMGSLSLGSNYATVSNNNFSLPQDSYYYACKSSEVEHGRSTSWSFPFTREFLSSSFEDVEGKGSDCCSDGVGENSESHEKINHDAKFSEENNPNEITVSGKEVDSGHSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRMYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRTSQSVYRRMERNPSFVCSRDNTLTTEIEPSSHSYCLNLLHNGVVLSNNMTSFPSFHGIAAGGGVEFGLNGSSPHTSGRREAMSNTPHVGLCAQPTPFDFFSGGRSNDRTYEYDHRRSQLAGFYPHYAPQYVMAMQQLNNNHNFYSFSNSSASTTIAREPSSSSLSVAETSDKVVISDPPDGVPPPFFDFLGVGAT* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1503 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 141 187 IPR017930 -
Apr7g1503 448 PANTHER MYB PROTEIN-RELATED 22 448 - -
Apr7g1503 448 ProSiteProfiles Myb-like domain profile. 188 238 IPR001005 -
Apr7g1503 448 Gene3D - 141 192 - -
Apr7g1503 448 SUPERFAMILY Homeodomain-like 141 234 IPR009057 -
Apr7g1503 448 SMART sant 192 240 IPR001005 -
Apr7g1503 448 SMART sant 140 189 IPR001005 -
Apr7g1503 448 Gene3D - 194 265 - -
Apr7g1503 448 CDD SANT 144 185 IPR001005 -
Apr7g1503 448 ProSiteProfiles Myb-like domain profile. 141 187 IPR001005 -
Apr7g1503 448 CDD SANT 195 235 IPR001005 -
Apr7g1503 448 PANTHER MYB TRANSCRIPTION FACTOR 22 448 - -
Apr7g1503 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 188 242 IPR017930 -
Apr7g1503 448 Pfam Myb-like DNA-binding domain 141 187 IPR001005 -
Apr7g1503 448 Pfam Myb-like DNA-binding domain 193 236 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1503 Apr-Chr7 22212544 22214547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1503 134 275 MYB Transcription Factor Family AT1G69560 78.472 5.02e-77 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Apr7g1503 Myb_DNA-binding 2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1503 K09422 - gmx:100776292 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1503 7 22212544 22214547 Apr7g1503 7 22212544 22214547 ECH