Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1498 ATGGGGAAAGGAAGAAGTCCTGGGAAATGGTTCAGGAACTTGCTCTTGGGGAAGAAATCATCCTCAAAGTCTACTTCATCGAAGAAGAATGATATTTTTAAAACTCCAAGTGACAAGGATGTGCTGGTGTCTTCTGGGGTTTCCGTTTCTGTTCCAACTGTGGATTCTTTGCTGATATCCCCACCAATATCTGGAGCTAATGATACTAAAGGAGTGCTTTCAGAAAAGGAGGTAGTTAGTATTTCATCACATGATGATAGGGATGTTGTGTCAACGGGAGATGCAGAGGCAGTGCAAGCTGTTGCTTATTTTGGATCTCAAGAGGATCTTGAAAAACTCCAGCTTACAGAAGCAGCTATAAAATTTCAGGCTGCTTGTAGAGGCTATCAGGCCCGTCAGACATTTCAAACACTCAAGGGTGTCGTTCAACTGCAAGCTCTTGTTCGTGGCCATTTGGTTAGAAGACAAGCTGTTTCTGCTTTATACTGTGTGAAGGGAATAGTTAAATTTCAAGCATTGGCTCGTGGTTACAATGTTAGACGTTCTGATATTGGGCTTGCAGTCCAGAAGATTCATAAGGATACTCAATGTTCAAATTCTATAGGGGTAGTTTCATCCTCAAAAGCAGAGAAGCTGTCAGAAAGTGTCTTTGTTCAAAAGCTTCTGGCTTCATCCCCGTATGCAGTTCCTCTATCTCTCAATGGTGATCCTGGAGAACCTAGCTTGGCTTCAAAGTGGCTTGACCGTTGGACAAGGTCACACTTTTGGGCTCCTCTTCCTGAGTTAAAGAAGAAACTTGACCCTGTTTCTGATGAGAAAAATGACAGTTCTCAGACAGTTGAAAGGGGACAAGTTAAAAGAAATACCCGGAAATCTCCTGCTGTCAAGGTTGGTGATGGCTCAAATTCTGGTTCTAACAAATATAAACAGCGTCCAAAAAAGGATTCAAGTCACCCATTGCCTTCAGTTCAGGAACACCCACAAAAAGAAACTGAGAACAGTAGTTCTAAACAAACTCGTGCACATAATGTTTCAGATGGATCTGAGGTTGTTAATGAAAAAAGAAAACATAGCAGTAGAAAATTTTCAGATCATACTGCCACTGATGTTTCAGAGCAGGGCACAGCTGCCTTGTTAGAGAAAACGAAGGATTTGAAATTGGAGAAAATAAAGGATTTGAAAGTGCCAAAGTCGAAAGAGTCCAATCGTGAGAAAGGTCTTGGACAGCAAGCAAAAGATGAGAATGATAATCTGACACTTAATGATCCTATTGCTGTCTTAGATACTAGTGTGAAGAAGGGTGGAGATCAAAGGATTCAAGGAATCAATGAGGATTTGAGTGGCGGTGACCACTGTATCAGTAACAACTGCCAAAGAAGAGCTTCACTACCTGGCAATTTTAATGATCAAGATAATGAGTTAAATAGTACTCCAAGAGTGCCTAGTTACATGGCACCTACTGAATCTGCAAAAGCTAAGCTAAGAGGACAAGGCTCCCCAAGATTTGCTACTGATTTGGTAGACAAAAACAGTATAACCAGGCGCCATTCACTTTCATCTTCACTTAATGGCAGGTCAGGTTCATTTTCCCCGAGAGCTGAAAGACTGGTAGCCATGAGCGGTAGAGGAGTGATGAGGTCTGATAGATCTCTGTCATCTTCAAGGGATGGGACTGAAAAGTTGATCCAACCTCAATGGAGAAGGTGA 1707 0.4194 MGKGRSPGKWFRNLLLGKKSSSKSTSSKKNDIFKTPSDKDVLVSSGVSVSVPTVDSLLISPPISGANDTKGVLSEKEVVSISSHDDRDVVSTGDAEAVQAVAYFGSQEDLEKLQLTEAAIKFQAACRGYQARQTFQTLKGVVQLQALVRGHLVRRQAVSALYCVKGIVKFQALARGYNVRRSDIGLAVQKIHKDTQCSNSIGVVSSSKAEKLSESVFVQKLLASSPYAVPLSLNGDPGEPSLASKWLDRWTRSHFWAPLPELKKKLDPVSDEKNDSSQTVERGQVKRNTRKSPAVKVGDGSNSGSNKYKQRPKKDSSHPLPSVQEHPQKETENSSSKQTRAHNVSDGSEVVNEKRKHSSRKFSDHTATDVSEQGTAALLEKTKDLKLEKIKDLKVPKSKESNREKGLGQQAKDENDNLTLNDPIAVLDTSVKKGGDQRIQGINEDLSGGDHCISNNCQRRASLPGNFNDQDNELNSTPRVPSYMAPTESAKAKLRGQGSPRFATDLVDKNSITRRHSLSSSLNGRSGSFSPRAERLVAMSGRGVMRSDRSLSSSRDGTEKLIQPQWRR* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1498 568 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 157 IPR027417 -
Apr7g1498 568 SMART iq_5 114 136 IPR000048 GO:0005515
Apr7g1498 568 SMART iq_5 137 158 IPR000048 GO:0005515
Apr7g1498 568 SMART iq_5 162 184 IPR000048 GO:0005515
Apr7g1498 568 ProSiteProfiles IQ motif profile. 139 166 IPR000048 GO:0005515
Apr7g1498 568 MobiDBLite consensus disorder prediction 17 31 - -
Apr7g1498 568 Gene3D - 113 161 - -
Apr7g1498 568 MobiDBLite consensus disorder prediction 546 560 - -
Apr7g1498 568 MobiDBLite consensus disorder prediction 379 411 - -
Apr7g1498 568 Pfam IQ calmodulin-binding motif 116 136 IPR000048 GO:0005515
Apr7g1498 568 Pfam IQ calmodulin-binding motif 139 156 IPR000048 GO:0005515
Apr7g1498 568 Pfam IQ calmodulin-binding motif 165 181 IPR000048 GO:0005515
Apr7g1498 568 MobiDBLite consensus disorder prediction 267 288 - -
Apr7g1498 568 Pfam Protein of unknown function (DUF4005) 471 547 IPR025064 -
Apr7g1498 568 MobiDBLite consensus disorder prediction 517 568 - -
Apr7g1498 568 MobiDBLite consensus disorder prediction 267 421 - -
Apr7g1498 568 MobiDBLite consensus disorder prediction 16 38 - -
Apr7g1498 568 MobiDBLite consensus disorder prediction 347 367 - -
Apr7g1498 568 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 565 - -
Apr7g1498 568 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Apr7g1498 568 PANTHER IQ-DOMAIN 5-RELATED 1 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1498 Apr-Chr7 22156717 22162352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1498 4 568 IQD Protein Family AT1G14380 33.553 8.65e-82 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1498 - - aprc:113869184 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1498 7 22156717 22162352 Apr7g1498 7 22156717 22162352 ECH
Apr7g1498 7 22156717 22162352 Apr1g0896 1 12110853 12118354 ECH
Apr7g1498 7 22156717 22162352 Apr9g3019 9 37036015 37043413 ECH
Apr7g1498 7 22156717 22162352 Apr9g3019 9 37036015 37043413 PCT